FFCP PHASE1:Hg19::chr10:47079076..47079087,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:47079076..47079087,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_at_chr10:47079076..47079087,+ | |description=CAGE_peak_at_chr10:47079076..47079087,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000415!4.59e-10!2 | |ontology_enrichment_celltype=CL:1000415!4.59e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;3.56e-08;2 | |ontology_enrichment_celltype_v019=CL:1000415;3.56e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.56e-09,253;CL:1000415,3.56e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.46e-54;29!UBERON:0001045;2.75e-14;1!UBERON:0006595;1.17e-07;86 | |ontology_enrichment_development_v019=UBERON:0008947;5.46e-54;29!UBERON:0001045;2.75e-14;1!UBERON:0006595;1.17e-07;86 | ||
|ontology_enrichment_disease=DOID:162!3.92e-10!235;DOID:0050687!4.82e-10!143;DOID:14566!8.75e-10!239;DOID:305!9.84e-10!106 | |ontology_enrichment_disease=DOID:162!3.92e-10!235;DOID:0050687!4.82e-10!143;DOID:14566!8.75e-10!239;DOID:305!9.84e-10!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.62e-17,106;DOID:0050687,4.74e-12,143;DOID:162,1.70e-09,235;DOID:14566,2.89e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.06e-41!9;UBERON:0001557!1.89e-27!19;UBERON:0008947!2.83e-15!38;UBERON:0003258!2.83e-15!38;UBERON:0000072!3.45e-14!46;UBERON:0000065!5.76e-14!53;UBERON:0000063!6.74e-14!97;UBERON:0001004!1.86e-09!72;UBERON:0004921!3.38e-08!129;UBERON:0004185!3.38e-08!129;UBERON:0001155!3.81e-08!9;UBERON:0001007!6.35e-08!155;UBERON:0001555!6.35e-08!155;UBERON:0007026!6.35e-08!155;UBERON:0004119!9.21e-08!169;UBERON:0000925!9.21e-08!169;UBERON:0006595!9.21e-08!169;UBERON:0002110!5.66e-07!3;UBERON:0006242!5.66e-07!3 | |ontology_enrichment_uberon=UBERON:0001737!2.06e-41!9;UBERON:0001557!1.89e-27!19;UBERON:0008947!2.83e-15!38;UBERON:0003258!2.83e-15!38;UBERON:0000072!3.45e-14!46;UBERON:0000065!5.76e-14!53;UBERON:0000063!6.74e-14!97;UBERON:0001004!1.86e-09!72;UBERON:0004921!3.38e-08!129;UBERON:0004185!3.38e-08!129;UBERON:0001155!3.81e-08!9;UBERON:0001007!6.35e-08!155;UBERON:0001555!6.35e-08!155;UBERON:0007026!6.35e-08!155;UBERON:0004119!9.21e-08!169;UBERON:0000925!9.21e-08!169;UBERON:0006595!9.21e-08!169;UBERON:0002110!5.66e-07!3;UBERON:0006242!5.66e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.07e-118;9!UBERON:0001557;2.07e-118;9!UBERON:0000072;4.69e-37;37!UBERON:0000065;6.51e-29;44!UBERON:0001004;5.86e-16;65!UBERON:0001154;2.75e-14;1!UBERON:0001153;2.75e-14;1!UBERON:0009854;2.75e-14;1 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.07e-118;9!UBERON:0001557;2.07e-118;9!UBERON:0000072;4.69e-37;37!UBERON:0000065;6.51e-29;44!UBERON:0001004;5.86e-16;65!UBERON:0001154;2.75e-14;1!UBERON:0001153;2.75e-14;1!UBERON:0009854;2.75e-14;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.07e-118,9;UBERON:0001557,8.94e-56,19;UBERON:0008947,6.01e-41,38;UBERON:0003258,6.01e-41,38;UBERON:0000072,6.64e-33,47;UBERON:0000065,1.70e-28,54;UBERON:0001004,1.75e-20,74;UBERON:0001041,3.04e-17,87;UBERON:0004921,1.09e-14,118;UBERON:0001154,2.75e-14,1;UBERON:0001153,2.75e-14,1;UBERON:0001045,2.75e-14,1;UBERON:0001007,6.09e-14,145;UBERON:0001555,6.09e-14,145;UBERON:0007026,6.09e-14,145;UBERON:0004119,1.67e-12,160;UBERON:0000925,1.67e-12,160;UBERON:0006595,1.67e-12,160;UBERON:0001048,1.29e-10,160;UBERON:0011216,5.36e-07,223 | |||
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| ||
|short_description=p@chr10:47079076..47079087,+ | |short_description=p@chr10:47079076..47079087,+ | ||
}} | }} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:47079076..47079087, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:47079076..47079087, + |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.56e-09 | 253 |
epithelial cell of gall bladder | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.07e-118 | 9 |
upper respiratory tract | 8.94e-56 | 19 |
respiratory primordium | 6.01e-41 | 38 |
endoderm of foregut | 6.01e-41 | 38 |
segment of respiratory tract | 6.64e-33 | 47 |
respiratory tract | 1.70e-28 | 54 |
respiratory system | 1.75e-20 | 74 |
foregut | 3.04e-17 | 87 |
subdivision of digestive tract | 1.09e-14 | 118 |
vermiform appendix | 2.75e-14 | 1 |
caecum | 2.75e-14 | 1 |
midgut | 2.75e-14 | 1 |
digestive system | 6.09e-14 | 145 |
digestive tract | 6.09e-14 | 145 |
primitive gut | 6.09e-14 | 145 |
endoderm-derived structure | 1.67e-12 | 160 |
endoderm | 1.67e-12 | 160 |
presumptive endoderm | 1.67e-12 | 160 |
primordium | 1.29e-10 | 160 |
organ system subdivision | 5.36e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.62e-17 | 106 |
cell type cancer | 4.74e-12 | 143 |
cancer | 1.70e-09 | 235 |
disease of cellular proliferation | 2.89e-09 | 239 |