FFCP PHASE1:Hg19::chr12:111078173..111078186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79600 | |EntrezGene=79600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26113 | |HGNC=26113 | ||
|TSSclassifier=strong | |||
|UniProt=F8VSB8 | |UniProt=F8VSB8 | ||
|association_with_transcript=-64bp_to_ENST00000547461_5end | |association_with_transcript=-64bp_to_ENST00000547461_5end | ||
|cluster_id=chr12:111078173..111078186,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_7_at_TCTN1_5end | |description=CAGE_peak_7_at_TCTN1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.43e-42!24;CL:0000826!1.43e-42!24;CL:0000236!3.32e-36!14;CL:0000838!1.01e-20!52;CL:0000542!3.19e-20!53;CL:0000051!3.19e-20!53;CL:0000785!6.45e-07!2;CL:0000955!6.45e-07!2;CL:0000818!6.45e-07!2;CL:0000954!6.45e-07!2;CL:0000816!6.45e-07!2 | |ontology_enrichment_celltype=CL:0000945!1.43e-42!24;CL:0000826!1.43e-42!24;CL:0000236!3.32e-36!14;CL:0000838!1.01e-20!52;CL:0000542!3.19e-20!53;CL:0000051!3.19e-20!53;CL:0000785!6.45e-07!2;CL:0000955!6.45e-07!2;CL:0000818!6.45e-07!2;CL:0000954!6.45e-07!2;CL:0000816!6.45e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.36e-107;13!CL:0000945;9.30e-69;24!CL:0000542;1.49e-23;53!CL:0000047;5.13e-07;2 | |ontology_enrichment_celltype_v019=CL:0000236;1.36e-107;13!CL:0000945;9.30e-69;24!CL:0000542;1.49e-23;53!CL:0000047;5.13e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.47e-100,14;CL:0000945,9.04e-69,24;CL:0000826,9.04e-69,24;CL:0000838,5.32e-31,52;CL:0000542,2.18e-30,53;CL:0000051,2.18e-30,53;CL:0002087,4.81e-13,115;CL:0002031,1.94e-12,120;CL:0000738,8.57e-11,136;CL:0002032,1.56e-10,161;CL:0000837,1.56e-10,161;CL:0000037,5.06e-10,168;CL:0000988,2.01e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.49e-23;53 | |ontology_enrichment_development_v019=CL:0000051;1.49e-23;53 | ||
|ontology_enrichment_disease=DOID:0060058!1.79e-07!10;DOID:114!7.25e-07!2 | |ontology_enrichment_disease=DOID:0060058!1.79e-07!10;DOID:114!7.25e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-15!115;UBERON:0005383!2.72e-09!3;UBERON:0005382!2.72e-09!3;UBERON:0000369!4.62e-07!4;UBERON:0002435!4.62e-07!4;UBERON:0000204!4.62e-07!4;UBERON:0010082!4.62e-07!4;UBERON:0001873!5.73e-07!2;UBERON:0010122!5.73e-07!2;UBERON:0004177!7.20e-07!7;UBERON:0009663!8.04e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.85e-15!115;UBERON:0005383!2.72e-09!3;UBERON:0005382!2.72e-09!3;UBERON:0000369!4.62e-07!4;UBERON:0002435!4.62e-07!4;UBERON:0000204!4.62e-07!4;UBERON:0010082!4.62e-07!4;UBERON:0001873!5.73e-07!2;UBERON:0010122!5.73e-07!2;UBERON:0004177!7.20e-07!7;UBERON:0009663!8.04e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;9.17e-13;1!UBERON:0000026;9.17e-13;1!UBERON:0008784;9.17e-13;1!UBERON:0006058;9.17e-13;1!UBERON:0003663;9.17e-13;1!UBERON:0004256;9.17e-13;1!UBERON:0004708;9.17e-13;1!UBERON:0002101;9.17e-13;1!UBERON:0004709;9.17e-13;1!UBERON:0002529;9.17e-13;1!UBERON:0010538;9.17e-13;1!UBERON:0003661;9.17e-13;1!UBERON:0010890;9.17e-13;1!UBERON:0002471;9.17e-13;1!UBERON:0001383;9.17e-13;1!UBERON:0010758;9.17e-13;1!UBERON:0010707;9.17e-13;1!UBERON:0000978;9.17e-13;1!UBERON:0002103;9.17e-13;1!UBERON:0001665;9.17e-13;1!UBERON:0003823;9.17e-13;1!UBERON:0000154;9.17e-13;1!UBERON:0010709;9.17e-13;1!UBERON:0005090;5.13e-07;2!UBERON:0001630;5.13e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001389;9.17e-13;1!UBERON:0000026;9.17e-13;1!UBERON:0008784;9.17e-13;1!UBERON:0006058;9.17e-13;1!UBERON:0003663;9.17e-13;1!UBERON:0004256;9.17e-13;1!UBERON:0004708;9.17e-13;1!UBERON:0002101;9.17e-13;1!UBERON:0004709;9.17e-13;1!UBERON:0002529;9.17e-13;1!UBERON:0010538;9.17e-13;1!UBERON:0003661;9.17e-13;1!UBERON:0010890;9.17e-13;1!UBERON:0002471;9.17e-13;1!UBERON:0001383;9.17e-13;1!UBERON:0010758;9.17e-13;1!UBERON:0010707;9.17e-13;1!UBERON:0000978;9.17e-13;1!UBERON:0002103;9.17e-13;1!UBERON:0001665;9.17e-13;1!UBERON:0003823;9.17e-13;1!UBERON:0000154;9.17e-13;1!UBERON:0010709;9.17e-13;1!UBERON:0005090;5.13e-07;2!UBERON:0001630;5.13e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.68e-13,1;UBERON:0001389,7.68e-13,1;UBERON:0000026,7.68e-13,1;UBERON:0008784,7.68e-13,1;UBERON:0006058,7.68e-13,1;UBERON:0003663,7.68e-13,1;UBERON:0004256,7.68e-13,1;UBERON:0004708,7.68e-13,1;UBERON:0002101,7.68e-13,1;UBERON:0004709,7.68e-13,1;UBERON:0002529,7.68e-13,1;UBERON:0010538,7.68e-13,1;UBERON:0003661,7.68e-13,1;UBERON:0010890,7.68e-13,1;UBERON:0002471,7.68e-13,1;UBERON:0001383,7.68e-13,1;UBERON:0004357,7.68e-13,1;UBERON:0004347,7.68e-13,1;UBERON:0005420,7.68e-13,1;UBERON:0005732,7.68e-13,1;UBERON:0010758,7.68e-13,1;UBERON:0010707,7.68e-13,1;UBERON:0000978,7.68e-13,1;UBERON:0002103,7.68e-13,1;UBERON:0001665,7.68e-13,1;UBERON:0003823,7.68e-13,1;UBERON:0000154,7.68e-13,1;UBERON:0010709,7.68e-13,1;UBERON:0005733,7.68e-13,1;UBERON:0005730,7.68e-13,1;UBERON:0005090,4.69e-07,2;UBERON:0001630,4.69e-07,2 | |||
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| ||
|short_description=p7@TCTN1 | |short_description=p7@TCTN1 | ||
}} | }} |
Latest revision as of 08:57, 16 September 2015
Short description: | p7@TCTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TCTN1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -64bp_to_ENST00000547461_5end |
EntrezGene: | TCTN1 |
HGNC: | 26113 |
UniProt: | F8VSB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.47e-100 | 14 |
lymphocyte of B lineage | 9.04e-69 | 24 |
pro-B cell | 9.04e-69 | 24 |
lymphoid lineage restricted progenitor cell | 5.32e-31 | 52 |
lymphocyte | 2.18e-30 | 53 |
common lymphoid progenitor | 2.18e-30 | 53 |
nongranular leukocyte | 4.81e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.94e-12 | 120 |
leukocyte | 8.57e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.56e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-10 | 161 |
hematopoietic stem cell | 5.06e-10 | 168 |
hematopoietic cell | 2.01e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 7.68e-13 | 1 |
soleus muscle | 7.68e-13 | 1 |
appendage | 7.68e-13 | 1 |
lower limb segment | 7.68e-13 | 1 |
multi-limb segment region | 7.68e-13 | 1 |
hindlimb muscle | 7.68e-13 | 1 |
hindlimb zeugopod muscle | 7.68e-13 | 1 |
paired limb/fin | 7.68e-13 | 1 |
limb | 7.68e-13 | 1 |
pelvic appendage | 7.68e-13 | 1 |
limb segment | 7.68e-13 | 1 |
paired limb/fin segment | 7.68e-13 | 1 |
limb muscle | 7.68e-13 | 1 |
pelvic complex muscle | 7.68e-13 | 1 |
zeugopod | 7.68e-13 | 1 |
muscle of leg | 7.68e-13 | 1 |
paired limb/fin bud | 7.68e-13 | 1 |
limb bud | 7.68e-13 | 1 |
pelvic appendage bud | 7.68e-13 | 1 |
limb/fin field | 7.68e-13 | 1 |
subdivision of organism along appendicular axis | 7.68e-13 | 1 |
appendage girdle complex | 7.68e-13 | 1 |
leg | 7.68e-13 | 1 |
hindlimb | 7.68e-13 | 1 |
triceps surae | 7.68e-13 | 1 |
hindlimb zeugopod | 7.68e-13 | 1 |
posterior region of body | 7.68e-13 | 1 |
pelvic complex | 7.68e-13 | 1 |
limb field | 7.68e-13 | 1 |
hindlimb/pelvic fin field | 7.68e-13 | 1 |
muscle structure | 4.69e-07 | 2 |
muscle organ | 4.69e-07 | 2 |