FFCP PHASE1:Hg19::chr2:45396649..45396671,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:45396649..45396671,+ | |||
|description=CAGE_peak_at_chr2:45396649..45396671,+ | |description=CAGE_peak_at_chr2:45396649..45396671,+ | ||
|id=chr2:45396649..45396671,+ | |id=chr2:45396649..45396671,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002602;7.05e-18;2!CL:0000138;1.94e-12;6!CL:0002564;9.05e-12;3!CL:0000228;3.00e-09;1!CL:0002372;3.00e-09;1!CL:0000153;1.83e-08;9!CL:0000447;1.83e-08;9!CL:0002595;3.03e-07;5 | |ontology_enrichment_celltype_v019=CL:0002602;7.05e-18;2!CL:0000138;1.94e-12;6!CL:0002564;9.05e-12;3!CL:0000228;3.00e-09;1!CL:0002372;3.00e-09;1!CL:0000153;1.83e-08;9!CL:0000447;1.83e-08;9!CL:0002595;3.03e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002602,7.07e-18,2;CL:0000058,2.67e-12,6;CL:0000138,2.67e-12,6;CL:0002564,1.04e-11,3;CL:0000228,2.55e-09,1;CL:0002372,2.55e-09,1;CL:0000153,2.26e-08,9;CL:0000447,2.26e-08,9;CL:0002595,2.85e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.16e-09;1!UBERON:0008425;1.16e-09;1 | |ontology_enrichment_development_v019=UBERON:0008801;1.16e-09;1!UBERON:0008425;1.16e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!1.48e-08!28;UBERON:0000930!1.48e-08!28;UBERON:0000481!2.00e-07!347;UBERON:0000161!2.39e-07!35 | |ontology_enrichment_uberon=UBERON:0000165!1.48e-08!28;UBERON:0000930!1.48e-08!28;UBERON:0000481!2.00e-07!347;UBERON:0000161!2.39e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.18e-26;5!UBERON:0002216;1.18e-26;5!UBERON:0011134;1.18e-26;5!UBERON:0002209;1.18e-26;5!UBERON:0002213;1.18e-26;5!UBERON:0007844;1.18e-26;5!UBERON:0011138;1.18e-26;5!UBERON:0001130;1.18e-26;5!UBERON:0001066;1.18e-26;5!UBERON:0001468;1.18e-26;5!UBERON:0006444;7.05e-18;2!UBERON:0001995;7.05e-18;2!UBERON:0004715;7.05e-18;2!UBERON:0004905;9.35e-17;8!UBERON:0000982;9.35e-17;8!UBERON:0004770;9.35e-17;8!UBERON:0000075;1.15e-12;16!UBERON:0002418;3.12e-12;3!UBERON:0004755;3.12e-12;3!UBERON:0002242;9.05e-12;3!UBERON:0004765;6.84e-11;26!UBERON:0001831;1.16e-09;1!UBERON:0001567;1.16e-09;1!UBERON:0001434;1.80e-09;36!UBERON:0003834;3.03e-07;5!UBERON:0001533;3.03e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0011135;1.18e-26;5!UBERON:0002216;1.18e-26;5!UBERON:0011134;1.18e-26;5!UBERON:0002209;1.18e-26;5!UBERON:0002213;1.18e-26;5!UBERON:0007844;1.18e-26;5!UBERON:0011138;1.18e-26;5!UBERON:0001130;1.18e-26;5!UBERON:0001066;1.18e-26;5!UBERON:0001468;1.18e-26;5!UBERON:0006444;7.05e-18;2!UBERON:0001995;7.05e-18;2!UBERON:0004715;7.05e-18;2!UBERON:0004905;9.35e-17;8!UBERON:0000982;9.35e-17;8!UBERON:0004770;9.35e-17;8!UBERON:0000075;1.15e-12;16!UBERON:0002418;3.12e-12;3!UBERON:0004755;3.12e-12;3!UBERON:0002242;9.05e-12;3!UBERON:0004765;6.84e-11;26!UBERON:0001831;1.16e-09;1!UBERON:0001567;1.16e-09;1!UBERON:0001434;1.80e-09;36!UBERON:0003834;3.03e-07;5!UBERON:0001533;3.03e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.40e-26,5;UBERON:0002216,1.40e-26,5;UBERON:0011134,1.40e-26,5;UBERON:0002209,1.40e-26,5;UBERON:0002213,1.40e-26,5;UBERON:0005856,1.40e-26,5;UBERON:0005866,1.40e-26,5;UBERON:0005863,1.40e-26,5;UBERON:0007844,1.40e-26,5;UBERON:0011138,1.40e-26,5;UBERON:0001130,1.40e-26,5;UBERON:0001066,1.40e-26,5;UBERON:0001468,1.40e-26,5;UBERON:0006444,7.07e-18,2;UBERON:0001995,7.07e-18,2;UBERON:0004715,7.07e-18,2;UBERON:0004905,1.04e-16,8;UBERON:0000982,1.04e-16,8;UBERON:0004770,1.04e-16,8;UBERON:0000075,1.43e-12,16;UBERON:0002418,3.13e-12,3;UBERON:0004755,3.13e-12,3;UBERON:0002242,1.04e-11,3;UBERON:0003068,1.04e-11,3;UBERON:0002328,1.04e-11,3;UBERON:0004880,1.04e-11,3;UBERON:0001831,1.12e-09,1;UBERON:0001567,1.12e-09,1;UBERON:0008801,1.12e-09,1;UBERON:0003834,2.85e-07,5;UBERON:0001533,2.85e-07,5 | |||
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| ||
|short_description=p@chr2:45396649..45396671,+ | |short_description=p@chr2:45396649..45396671,+ | ||
}} | }} |
Latest revision as of 10:25, 29 July 2015
Short description: | p@chr2:45396649..45396671, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45396649..45396671, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 7.07e-18 | 2 |
chondroblast | 2.67e-12 | 6 |
chondrocyte | 2.67e-12 | 6 |
nucleus pulposus cell of intervertebral disc | 1.04e-11 | 3 |
multinucleate cell | 2.55e-09 | 1 |
myotube | 2.55e-09 | 1 |
GAG secreting cell | 2.26e-08 | 9 |
carbohydrate secreting cell | 2.26e-08 | 9 |
smooth muscle cell of the subclavian artery | 2.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.40e-26 | 5 |
symphysis | 1.40e-26 | 5 |
nonsynovial joint | 1.40e-26 | 5 |
fibrous joint | 1.40e-26 | 5 |
cartilaginous joint | 1.40e-26 | 5 |
developing mesenchymal condensation | 1.40e-26 | 5 |
pre-cartilage condensation | 1.40e-26 | 5 |
cartilaginous condensation | 1.40e-26 | 5 |
cartilage element | 1.40e-26 | 5 |
post-cranial axial skeletal system | 1.40e-26 | 5 |
vertebral column | 1.40e-26 | 5 |
intervertebral disk | 1.40e-26 | 5 |
intervertebral joint | 1.40e-26 | 5 |
annulus fibrosus | 7.07e-18 | 2 |
fibrocartilage | 7.07e-18 | 2 |
annulus fibrosus disci intervertebralis | 7.07e-18 | 2 |
articulation | 1.04e-16 | 8 |
skeletal joint | 1.04e-16 | 8 |
articular system | 1.04e-16 | 8 |
subdivision of skeletal system | 1.43e-12 | 16 |
cartilage tissue | 3.13e-12 | 3 |
skeletal tissue | 3.13e-12 | 3 |
nucleus pulposus | 1.04e-11 | 3 |
axial mesoderm | 1.04e-11 | 3 |
notochord | 1.04e-11 | 3 |
chordamesoderm | 1.04e-11 | 3 |
parotid gland | 1.12e-09 | 1 |
cheek | 1.12e-09 | 1 |
parotid gland primordium | 1.12e-09 | 1 |
thoracic segment blood vessel | 2.85e-07 | 5 |
subclavian artery | 2.85e-07 | 5 |