FFCP PHASE1:Hg19::chr20:62130745..62130766,-: Difference between revisions
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|id=chr20:62130745..62130766,-
|short_description=p15@EEF1A2
|description=CAGE_peak_15_at_EEF1A2_5end
|association_with_transcript=-240bp_to_ENST00000217182,NM_0019...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1917 | |EntrezGene=1917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3192 | |HGNC=3192 | ||
|TSSclassifier=strong | |||
|UniProt=Q05639,Q59GP5 | |UniProt=Q05639,Q59GP5 | ||
|association_with_transcript=-240bp_to_ENST00000217182,NM_001958,uc002yfe.1,uc010gkg.1_5end | |||
|cluster_id=chr20:62130745..62130766,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_15_at_EEF1A2_5end | |||
|id=chr20:62130745..62130766,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.59e-28;5!CL:0002321;6.02e-10;15!CL:0002535;3.43e-09;2!CL:0000123;6.93e-09;2!CL:0000242;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.43e-09,2;CL:0000333,5.51e-09,41;CL:0000242,6.94e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.41e-09!10;DOID:3119!9.72e-09!14;DOID:0050687!1.15e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:169;6.70e-24;6!DOID:12603;1.93e-16;1!DOID:171;1.28e-14;10!DOID:3095;5.97e-07;22!DOID:2994;5.97e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.70e-24,6;DOID:12603,1.65e-16,1;DOID:171,1.28e-14,10;DOID:0050687,6.86e-08,143;DOID:3095,5.98e-07,22;DOID:2994,5.98e-07,22;DOID:162,8.46e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.19e-22!94;UBERON:0001016!3.19e-22!94;UBERON:0000955!1.88e-21!69;UBERON:0006238!1.88e-21!69;UBERON:0001017!8.69e-21!82;UBERON:0005743!1.16e-20!86;UBERON:0001049!3.18e-19!57;UBERON:0005068!3.18e-19!57;UBERON:0006241!3.18e-19!57;UBERON:0007135!3.18e-19!57;UBERON:0002616!2.57e-18!59;UBERON:0002346!6.61e-17!90;UBERON:0002780!3.19e-15!41;UBERON:0001890!3.19e-15!41;UBERON:0006240!3.19e-15!41;UBERON:0003080!9.79e-15!42;UBERON:0002619!7.16e-14!22;UBERON:0002020!7.82e-14!34;UBERON:0003528!7.82e-14!34;UBERON:0003075!2.00e-13!86;UBERON:0007284!2.00e-13!86;UBERON:0000924!2.17e-13!173;UBERON:0006601!2.17e-13!173;UBERON:0001869!5.49e-13!32;UBERON:0001893!5.42e-12!34;UBERON:0000956!7.38e-12!25;UBERON:0000203!7.38e-12!25;UBERON:0001950!3.52e-11!20;UBERON:0002791!4.91e-11!33;UBERON:0004121!6.93e-11!169;UBERON:0000033!7.60e-11!123;UBERON:0003056!9.21e-11!61;UBERON:0000153!1.02e-10!129;UBERON:0007811!1.02e-10!129;UBERON:0007023!5.41e-09!115;UBERON:0000200!6.50e-08!6;UBERON:0004733!1.70e-07!12;UBERON:0002028!1.70e-07!12;UBERON:0007277!1.70e-07!12;UBERON:0004732!7.87e-07!13;UBERON:0000988!9.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.59e-28;5!UBERON:0002410;1.59e-28;5!UBERON:0000010;3.60e-16;8!UBERON:0006955;3.43e-09;2!UBERON:0004801;3.43e-09;2!UBERON:0001905;6.93e-09;2!UBERON:0002757;6.93e-09;2!UBERON:0010134;6.93e-09;2!UBERON:0005408;6.93e-09;2!UBERON:0001899;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.59e-28,5;UBERON:0002410,1.59e-28,5;UBERON:0000010,3.61e-16,8;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2;UBERON:0001905,8.74e-09,2;UBERON:0002757,8.74e-09,2;UBERON:0010134,8.74e-09,2;UBERON:0005408,8.74e-09,2;UBERON:0001899,8.74e-09,2 | |||
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| ||
|short_description=p15@EEF1A2 | |||
}} | }} |
Latest revision as of 13:02, 17 September 2015
Short description: | p15@EEF1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_EEF1A2_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -240bp_to_ENST00000217182, NM_001958, uc002yfe.1, uc010gkg.1_5end |
EntrezGene: | EEF1A2 |
HGNC: | 3192 |
UniProt: | Q05639Q59GP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.43e-09 | 2 |
migratory neural crest cell | 5.51e-09 | 41 |
Merkel cell | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.59e-28 | 5 |
autonomic nervous system | 1.59e-28 | 5 |
peripheral nervous system | 3.61e-16 | 8 |
uterine epithelium | 3.43e-09 | 2 |
cervix epithelium | 3.43e-09 | 2 |
pineal body | 8.74e-09 | 2 |
regional part of epithalamus | 8.74e-09 | 2 |
secretory circumventricular organ | 8.74e-09 | 2 |
circumventricular organ | 8.74e-09 | 2 |
epithalamus | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.70e-24 | 6 |
acute leukemia | 1.65e-16 | 1 |
neuroectodermal tumor | 1.28e-14 | 10 |
cell type cancer | 6.86e-08 | 143 |
germ cell and embryonal cancer | 5.98e-07 | 22 |
germ cell cancer | 5.98e-07 | 22 |
cancer | 8.46e-07 | 235 |