FFCP PHASE1:Hg19::chr20:22504822..22504839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:22504822..22504839,- | |||
|coexpression_cluster_id=C703 | |coexpression_cluster_id=C703 | ||
|description=CAGE_peak_at_chr20:22504822..22504839,- | |description=CAGE_peak_at_chr20:22504822..22504839,- | ||
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|ontology_enrichment_celltype=CL:0000181!1.34e-31!12;CL:0000417!1.34e-31!12;CL:0000668!1.34e-31!12;CL:0000414!1.34e-31!12;CL:0000412!1.34e-31!12;CL:0000182!1.34e-31!12;CL:0000223!2.14e-13!59;CL:0002563!1.92e-11!4 | |ontology_enrichment_celltype=CL:0000181!1.34e-31!12;CL:0000417!1.34e-31!12;CL:0000668!1.34e-31!12;CL:0000414!1.34e-31!12;CL:0000412!1.34e-31!12;CL:0000182!1.34e-31!12;CL:0000223!2.14e-13!59;CL:0002563!1.92e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.72e-51;12 | |ontology_enrichment_celltype_v019=CL:0000182;3.72e-51;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.35e-51,12;CL:0000223,6.95e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.08e-56;11!UBERON:0009497;2.27e-47;13!UBERON:0001041;8.65e-21;30!UBERON:0003104;4.48e-20;31 | |ontology_enrichment_development_v019=UBERON:0004161;7.08e-56;11!UBERON:0009497;2.27e-47;13!UBERON:0001041;8.65e-21;30!UBERON:0003104;4.48e-20;31 | ||
|ontology_enrichment_disease=DOID:305!7.52e-07!106 | |ontology_enrichment_disease=DOID:305!7.52e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:7;7.20e-10;39 | |ontology_enrichment_disease_v019=DOID:7;7.20e-10;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,1.54e-10,39 | |||
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|short_description=p@chr20:22504822..22504839,- | |short_description=p@chr20:22504822..22504839,- | ||
}} | }} |
Latest revision as of 12:26, 28 July 2015
Short description: | p@chr20:22504822..22504839, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:22504822..22504839, - |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.35e-51 | 12 |
endodermal cell | 6.95e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.32e-46 | 19 |
digestive gland | 1.32e-46 | 19 |
liver bud | 1.32e-46 | 19 |
hepatic diverticulum | 2.63e-40 | 22 |
liver primordium | 2.63e-40 | 22 |
digestive tract diverticulum | 1.43e-38 | 23 |
epithelial sac | 1.63e-35 | 25 |
epithelium of foregut-midgut junction | 1.63e-35 | 25 |
anatomical boundary | 1.63e-35 | 25 |
hepatobiliary system | 1.63e-35 | 25 |
foregut-midgut junction | 1.63e-35 | 25 |
septum transversum | 1.63e-35 | 25 |
sac | 3.66e-34 | 26 |
exocrine gland | 1.05e-28 | 31 |
exocrine system | 1.05e-28 | 31 |
endocrine gland | 1.85e-25 | 35 |
endocrine system | 7.38e-20 | 45 |
gut epithelium | 1.39e-16 | 54 |
abdomen element | 1.39e-16 | 54 |
abdominal segment element | 1.39e-16 | 54 |
gland | 3.42e-15 | 59 |
abdominal segment of trunk | 6.09e-15 | 60 |
abdomen | 6.09e-15 | 60 |
endo-epithelium | 5.77e-11 | 82 |
foregut | 2.44e-10 | 87 |
trunk region element | 6.51e-09 | 101 |
subdivision of trunk | 4.87e-08 | 112 |
epithelial tube | 1.07e-07 | 117 |
subdivision of digestive tract | 1.45e-07 | 118 |
trunk mesenchyme | 2.22e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.54e-10 | 39 |