FFCP PHASE1:Hg19::chr21:47412107..47412140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47412107..47412140,- | |||
|coexpression_cluster_id=C198 | |coexpression_cluster_id=C198 | ||
|description=CAGE_peak_at_chr21:47412107..47412140,- | |description=CAGE_peak_at_chr21:47412107..47412140,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.74e-43!180;CL:0000057!6.43e-26!75;CL:0000680!4.06e-15!57;CL:0000056!4.06e-15!57;CL:0000355!4.06e-15!57;CL:0000183!1.21e-14!59;CL:0000187!1.71e-14!54;CL:0000393!2.52e-14!60;CL:0000211!2.52e-14!60;CL:0002620!1.72e-11!23;CL:0000192!9.05e-10!42;CL:0000514!9.05e-10!42;CL:0000048!1.04e-08!430;CL:0000723!4.22e-08!436;CL:0000034!4.81e-08!444 | |ontology_enrichment_celltype=CL:0000055!2.74e-43!180;CL:0000057!6.43e-26!75;CL:0000680!4.06e-15!57;CL:0000056!4.06e-15!57;CL:0000355!4.06e-15!57;CL:0000183!1.21e-14!59;CL:0000187!1.71e-14!54;CL:0000393!2.52e-14!60;CL:0000211!2.52e-14!60;CL:0002620!1.72e-11!23;CL:0000192!9.05e-10!42;CL:0000514!9.05e-10!42;CL:0000048!1.04e-08!430;CL:0000723!4.22e-08!436;CL:0000034!4.81e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.47e-16;23!CL:0000057;5.42e-12;73!CL:0000187;1.11e-11;55!CL:0000393;8.02e-11;61!CL:0000211;8.02e-11;61!CL:0000192;5.60e-10;43!CL:0002570;4.00e-09;8!CL:0000723;1.04e-08;61!CL:0000188;4.06e-08;9!CL:0000134;5.28e-08;55!CL:0002320;5.28e-08;188!CL:0000359;1.22e-07;32!CL:0000048;1.95e-07;58 | |ontology_enrichment_celltype_v019=CL:0002620;5.47e-16;23!CL:0000057;5.42e-12;73!CL:0000187;1.11e-11;55!CL:0000393;8.02e-11;61!CL:0000211;8.02e-11;61!CL:0000192;5.60e-10;43!CL:0002570;4.00e-09;8!CL:0000723;1.04e-08;61!CL:0000188;4.06e-08;9!CL:0000134;5.28e-08;55!CL:0002320;5.28e-08;188!CL:0000359;1.22e-07;32!CL:0000048;1.95e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.68e-29,76;CL:0000048,1.92e-20,427;CL:0000723,1.34e-19,433;CL:0000187,1.52e-19,55;CL:0000680,6.30e-19,58;CL:0000056,6.30e-19,58;CL:0000355,6.30e-19,58;CL:0000034,1.61e-18,441;CL:0000393,1.86e-17,61;CL:0000211,1.86e-17,61;CL:0002620,4.64e-16,23;CL:0000192,5.54e-14,43;CL:0000514,5.54e-14,43;CL:0002320,9.40e-11,361;CL:0002570,7.66e-09,8;CL:0000188,3.46e-08,9;CL:0000359,5.04e-08,32;CL:0000134,5.27e-08,354;CL:0002551,8.87e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000355;7.55e-11;58!CL:0000514;5.60e-10;43 | |ontology_enrichment_development_v019=CL:0000355;7.55e-11;58!CL:0000514;5.60e-10;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.03e-22!83;UBERON:0002329!1.03e-22!83;UBERON:0003077!1.03e-22!83;UBERON:0003059!1.03e-22!83;UBERON:0007282!1.03e-22!83;UBERON:0009618!1.03e-22!83;UBERON:0007285!1.03e-22!83;UBERON:0004290!1.84e-20!70;UBERON:0000486!2.04e-17!82;UBERON:0002385!5.00e-16!63;UBERON:0001015!5.00e-16!63;UBERON:0000383!5.00e-16!63;UBERON:0001134!1.08e-15!61;UBERON:0002036!1.08e-15!61;UBERON:0003082!1.08e-15!61;UBERON:0005256!5.21e-14!143;UBERON:0003102!1.22e-13!95;UBERON:0000475!1.17e-10!365;UBERON:0002199!6.87e-10!45;UBERON:0002416!6.87e-10!45;UBERON:0000481!1.16e-08!347;UBERON:0002100!4.33e-08!216;UBERON:0001013!5.55e-08!14;UBERON:0002097!3.42e-07!40;UBERON:0003104!6.97e-07!238;UBERON:0009142!6.97e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!1.03e-22!83;UBERON:0002329!1.03e-22!83;UBERON:0003077!1.03e-22!83;UBERON:0003059!1.03e-22!83;UBERON:0007282!1.03e-22!83;UBERON:0009618!1.03e-22!83;UBERON:0007285!1.03e-22!83;UBERON:0004290!1.84e-20!70;UBERON:0000486!2.04e-17!82;UBERON:0002385!5.00e-16!63;UBERON:0001015!5.00e-16!63;UBERON:0000383!5.00e-16!63;UBERON:0001134!1.08e-15!61;UBERON:0002036!1.08e-15!61;UBERON:0003082!1.08e-15!61;UBERON:0005256!5.21e-14!143;UBERON:0003102!1.22e-13!95;UBERON:0000475!1.17e-10!365;UBERON:0002199!6.87e-10!45;UBERON:0002416!6.87e-10!45;UBERON:0000481!1.16e-08!347;UBERON:0002100!4.33e-08!216;UBERON:0001013!5.55e-08!14;UBERON:0002097!3.42e-07!40;UBERON:0003104!6.97e-07!238;UBERON:0009142!6.97e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.64e-11;31!UBERON:0001015;5.64e-11;31!UBERON:0000383;5.64e-11;31!UBERON:0001013;8.46e-11;14!UBERON:0002199;5.20e-10;46!UBERON:0002416;5.20e-10;46!UBERON:0002067;2.04e-09;9!UBERON:0003102;3.77e-09;50!UBERON:0002384;8.91e-09;198!UBERON:0002097;1.01e-08;41!UBERON:0002204;2.35e-08;70!UBERON:0004905;2.57e-08;8!UBERON:0000982;2.57e-08;8!UBERON:0004770;2.57e-08;8!UBERON:0004573;8.45e-08;33!UBERON:0004571;8.45e-08;33!UBERON:0011135;2.36e-07;5!UBERON:0002216;2.36e-07;5!UBERON:0011134;2.36e-07;5!UBERON:0002209;2.36e-07;5!UBERON:0002213;2.36e-07;5!UBERON:0007844;2.36e-07;5!UBERON:0011138;2.36e-07;5!UBERON:0001130;2.36e-07;5!UBERON:0001066;2.36e-07;5!UBERON:0001468;2.36e-07;5!UBERON:0002072;3.20e-07;5!UBERON:0001134;3.49e-07;16!UBERON:0002036;3.49e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0002385;5.64e-11;31!UBERON:0001015;5.64e-11;31!UBERON:0000383;5.64e-11;31!UBERON:0001013;8.46e-11;14!UBERON:0002199;5.20e-10;46!UBERON:0002416;5.20e-10;46!UBERON:0002067;2.04e-09;9!UBERON:0003102;3.77e-09;50!UBERON:0002384;8.91e-09;198!UBERON:0002097;1.01e-08;41!UBERON:0002204;2.35e-08;70!UBERON:0004905;2.57e-08;8!UBERON:0000982;2.57e-08;8!UBERON:0004770;2.57e-08;8!UBERON:0004573;8.45e-08;33!UBERON:0004571;8.45e-08;33!UBERON:0011135;2.36e-07;5!UBERON:0002216;2.36e-07;5!UBERON:0011134;2.36e-07;5!UBERON:0002209;2.36e-07;5!UBERON:0002213;2.36e-07;5!UBERON:0007844;2.36e-07;5!UBERON:0011138;2.36e-07;5!UBERON:0001130;2.36e-07;5!UBERON:0001066;2.36e-07;5!UBERON:0001468;2.36e-07;5!UBERON:0002072;3.20e-07;5!UBERON:0001134;3.49e-07;16!UBERON:0002036;3.49e-07;16 | ||
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| ||
|short_description=p@chr21:47412107..47412140,- | |short_description=p@chr21:47412107..47412140,- | ||
}} | }} |
Latest revision as of 18:43, 28 July 2015
Short description: | p@chr21:47412107..47412140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47412107..47412140, - |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.68e-29 | 76 |
multi fate stem cell | 1.92e-20 | 427 |
somatic stem cell | 1.34e-19 | 433 |
muscle cell | 1.52e-19 | 55 |
muscle precursor cell | 6.30e-19 | 58 |
myoblast | 6.30e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.30e-19 | 58 |
stem cell | 1.61e-18 | 441 |
electrically responsive cell | 1.86e-17 | 61 |
electrically active cell | 1.86e-17 | 61 |
skin fibroblast | 4.64e-16 | 23 |
smooth muscle cell | 5.54e-14 | 43 |
smooth muscle myoblast | 5.54e-14 | 43 |
connective tissue cell | 9.40e-11 | 361 |
mesenchymal stem cell of adipose | 7.66e-09 | 8 |
cell of skeletal muscle | 3.46e-08 | 9 |
vascular associated smooth muscle cell | 5.04e-08 | 32 |
mesenchymal cell | 5.27e-08 | 354 |
fibroblast of dermis | 8.87e-07 | 6 |