FFCP PHASE1:Hg19::chr20:5903291..5903312,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:5903291..5903312,-
|short_description=p@chr20:5903291..5903312,-
|description=CAGE_peak_at_chr20:5903291..5903312,-
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:5903291..5903312,- | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903291..5903312,- | |||
|id=chr20:5903291..5903312,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.00e-14;1!CL:0000164;1.00e-14;1!CL:0000502;1.00e-14;1!CL:0000172;1.00e-14;1!CL:0000173;1.00e-14;1!CL:0002535;5.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.36e-15,1;CL:0000164,9.36e-15,1;CL:0000502,9.36e-15,1;CL:0000172,9.36e-15,1;CL:0000173,9.36e-15,1;CL:0002351,9.36e-15,1;CL:0002535,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.34e-19;3!CL:0002351;1.00e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.00e-14;1!DOID:0050619;2.11e-14;1!DOID:1357;2.11e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.36e-15,1;DOID:0050619,2.41e-14,1;DOID:1357,2.41e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.68e-51!57;UBERON:0005068!1.68e-51!57;UBERON:0006241!1.68e-51!57;UBERON:0007135!1.68e-51!57;UBERON:0002616!1.79e-49!59;UBERON:0000955!1.11e-48!69;UBERON:0006238!1.11e-48!69;UBERON:0002780!6.97e-45!41;UBERON:0001890!6.97e-45!41;UBERON:0006240!6.97e-45!41;UBERON:0001017!1.53e-44!82;UBERON:0003080!1.15e-43!42;UBERON:0005743!4.79e-42!86;UBERON:0000073!9.60e-42!94;UBERON:0001016!9.60e-42!94;UBERON:0003075!5.33e-38!86;UBERON:0007284!5.33e-38!86;UBERON:0002346!6.79e-36!90;UBERON:0002020!2.78e-35!34;UBERON:0003528!2.78e-35!34;UBERON:0001893!8.06e-35!34;UBERON:0001869!6.17e-34!32;UBERON:0002791!1.00e-32!33;UBERON:0007023!1.08e-31!115;UBERON:0002619!3.03e-29!22;UBERON:0000033!1.88e-28!123;UBERON:0003056!5.09e-28!61;UBERON:0000153!1.13e-26!129;UBERON:0007811!1.13e-26!129;UBERON:0000956!2.14e-25!25;UBERON:0000203!2.14e-25!25;UBERON:0001950!1.90e-24!20;UBERON:0004121!8.07e-23!169;UBERON:0000924!4.75e-22!173;UBERON:0006601!4.75e-22!173;UBERON:0003296!7.70e-14!4;UBERON:0010133!7.70e-14!4;UBERON:0002680!1.80e-12!9;UBERON:0001895!1.80e-12!9;UBERON:0010092!1.80e-12!9;UBERON:0000200!2.71e-12!6;UBERON:0004733!5.60e-12!12;UBERON:0002028!5.60e-12!12;UBERON:0007277!5.60e-12!12;UBERON:0001894!1.35e-11!7;UBERON:0006222!1.35e-11!7;UBERON:0002308!2.82e-11!9;UBERON:0000125!2.82e-11!9;UBERON:0004732!5.70e-11!13;UBERON:0000025!7.75e-11!194;UBERON:0000988!5.24e-10!3;UBERON:0000349!1.05e-09!5;UBERON:0001872!1.32e-09!5;UBERON:0003076!2.33e-09!15;UBERON:0003057!2.33e-09!15;UBERON:0001871!4.03e-09!7;UBERON:0004111!2.14e-08!241;UBERON:0000007!6.91e-08!2;UBERON:0002420!8.57e-08!9;UBERON:0007245!8.57e-08!9;UBERON:0010009!8.57e-08!9;UBERON:0010011!8.57e-08!9;UBERON:0000454!8.57e-08!9;UBERON:0001905!1.24e-07!2;UBERON:0002757!1.24e-07!2;UBERON:0010134!1.24e-07!2;UBERON:0002784!1.24e-07!2;UBERON:0005408!1.24e-07!2;UBERON:0001899!1.24e-07!2;UBERON:0000064!3.08e-07!219;UBERON:0001870!3.17e-07!2;UBERON:0000369!3.43e-07!4;UBERON:0002435!3.43e-07!4;UBERON:0000204!3.43e-07!4;UBERON:0010082!3.43e-07!4;UBERON:0002148!4.32e-07!2;UBERON:0009662!4.32e-07!2;UBERON:0001954!4.45e-07!2;UBERON:0003022!4.45e-07!2;UBERON:0002421!4.45e-07!2;UBERON:0002600!4.45e-07!2;UBERON:0009663!8.64e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.31e-53;4!UBERON:0010133;5.31e-53;4!UBERON:0001894;1.66e-30;7!UBERON:0000007;7.10e-28;2!UBERON:0001905;5.33e-27;2!UBERON:0002757;5.33e-27;2!UBERON:0010134;5.33e-27;2!UBERON:0005408;5.33e-27;2!UBERON:0001899;5.33e-27;2!UBERON:0001764;2.11e-14;1!UBERON:0001825;2.11e-14;1!UBERON:0002784;5.02e-14;4!UBERON:0002780;2.04e-12;41!UBERON:0001890;2.04e-12;41!UBERON:0000073;1.72e-10;53!UBERON:0002616;1.72e-10;53!UBERON:0002037;6.07e-10;6!UBERON:0000955;2.35e-09;68!UBERON:0006955;5.74e-08;2!UBERON:0004801;5.74e-08;2!UBERON:0001954;7.52e-08;2!UBERON:0003022;7.52e-08;2!UBERON:0002421;7.52e-08;2!UBERON:0002600;7.52e-08;2!UBERON:0002680;6.50e-07;9!UBERON:0001895;6.50e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,7.95e-53,4;UBERON:0010133,7.95e-53,4;UBERON:0001894,2.09e-30,7;UBERON:0006222,2.09e-30,7;UBERON:0000007,7.10e-28,2;UBERON:0001905,7.96e-27,2;UBERON:0002757,7.96e-27,2;UBERON:0010134,7.96e-27,2;UBERON:0005408,7.96e-27,2;UBERON:0001899,7.96e-27,2;UBERON:0000073,7.32e-19,53;UBERON:0002616,7.32e-19,53;UBERON:0001049,8.01e-18,56;UBERON:0005068,8.01e-18,56;UBERON:0006241,8.01e-18,56;UBERON:0007135,8.01e-18,56;UBERON:0002780,8.13e-15,41;UBERON:0001890,8.13e-15,41;UBERON:0003080,8.13e-15,41;UBERON:0006240,8.13e-15,41;UBERON:0001764,2.41e-14,1;UBERON:0001825,2.41e-14,1;UBERON:0000955,2.41e-14,68;UBERON:0006238,2.41e-14,68;UBERON:0002784,6.13e-14,4;UBERON:0001017,5.98e-12,81;UBERON:0003075,5.98e-12,82;UBERON:0007284,5.98e-12,82;UBERON:0002346,2.35e-11,86;UBERON:0001016,1.10e-10,89;UBERON:0002037,6.21e-10,6;UBERON:0006215,6.21e-10,6;UBERON:0003056,7.24e-10,61;UBERON:0010371,3.06e-09,104;UBERON:0007023,1.90e-08,114;UBERON:0006955,5.74e-08,2;UBERON:0004801,5.74e-08,2;UBERON:0001954,6.15e-08,2;UBERON:0003022,6.15e-08,2;UBERON:0002421,6.15e-08,2;UBERON:0002600,6.15e-08,2;UBERON:0000949,2.62e-07,45;UBERON:0010314,4.43e-07,132;UBERON:0002680,6.60e-07,9;UBERON:0001895,6.60e-07,9;UBERON:0010092,6.60e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,2.01546198283421,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.868124974666461,0,0.361789315876224,3.05163472634166,0.995213339381022,7.38869047383869,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0.686379991447858,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0.886068179966986,0.732157589411779,0.1251909307065,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.982886743728125,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,1.07140367175657,1.3451348888753,6.67662164660295,4.09791944432336,0,0,0,0.951576261675644,0.328863867814245,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,10.9422926338753,0,0,0,0.452888530700021,0.231522474323834,0,11.7579324090381,0,3.77082475362602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,2.01546198283421,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.868124974666461,0,0.361789315876224,3.05163472634166,0.995213339381022,7.38869047383869,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0.686379991447858,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0.886068179966986,0.732157589411779,0.1251909307065,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.982886743728125,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,1.07140367175657,1.3451348888753,6.67662164660295,4.09791944432336,0,0,0,0.951576261675644,0.328863867814245,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,10.9422926338753,0,0,0,0.452888530700021,0.231522474323834,0,11.7579324090381,0,3.77082475362602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:5903291..5903312,- | |||
}} | }} |
Latest revision as of 16:00, 28 July 2015
Short description: | p@chr20:5903291..5903312, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903291..5903312, - |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.36e-15 | 1 |
enteroendocrine cell | 9.36e-15 | 1 |
type D enteroendocrine cell | 9.36e-15 | 1 |
somatostatin secreting cell | 9.36e-15 | 1 |
pancreatic D cell | 9.36e-15 | 1 |
progenitor cell of endocrine pancreas | 9.36e-15 | 1 |
epithelial cell of cervix | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.36e-15 | 1 |
paranasal sinus cancer | 2.41e-14 | 1 |
maxillary sinus cancer | 2.41e-14 | 1 |