FFCP PHASE1:Hg19::chr20:57429373..57429387,+: Difference between revisions
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|id=chr20:57429373..57429387,+
|short_description=p13@GNAS
|description=CAGE_peak_13_at_GNAS_5end
|association_with_transcript=149bp_to_ENST00000481768_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2778 | |EntrezGene=2778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |HGNC=4392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=149bp_to_ENST00000481768_5end | |||
|cluster_id=chr20:57429373..57429387,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_13_at_GNAS_5end | |||
|id=chr20:57429373..57429387,+ | |||
|ontology_enrichment_celltype=CL:0002322!9.91e-13!5;CL:0000047!3.47e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.39e-16;5!CL:0000047;8.72e-11;2!CL:0002321;2.50e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.30e-16,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.93e-07;1!UBERON:0008425;9.93e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.62e-21!115;UBERON:0001049!5.94e-19!57;UBERON:0005068!5.94e-19!57;UBERON:0006241!5.94e-19!57;UBERON:0007135!5.94e-19!57;UBERON:0001017!1.06e-18!82;UBERON:0000073!1.08e-17!94;UBERON:0001016!1.08e-17!94;UBERON:0005743!1.84e-17!86;UBERON:0002616!9.27e-15!59;UBERON:0003076!5.13e-14!15;UBERON:0003057!5.13e-14!15;UBERON:0000924!1.25e-13!173;UBERON:0006601!1.25e-13!173;UBERON:0002346!9.44e-13!90;UBERON:0004121!1.67e-12!169;UBERON:0000955!1.58e-11!69;UBERON:0006238!1.58e-11!69;UBERON:0003075!1.72e-11!86;UBERON:0007284!1.72e-11!86;UBERON:0004733!2.53e-11!12;UBERON:0002028!2.53e-11!12;UBERON:0007277!2.53e-11!12;UBERON:0002298!1.34e-10!8;UBERON:0004732!2.44e-10!13;UBERON:0000153!4.02e-10!129;UBERON:0007811!4.02e-10!129;UBERON:0002780!3.35e-09!41;UBERON:0001890!3.35e-09!41;UBERON:0006240!3.35e-09!41;UBERON:0002020!4.56e-09!34;UBERON:0003528!4.56e-09!34;UBERON:0003080!6.65e-09!42;UBERON:0001893!1.04e-08!34;UBERON:0000988!3.49e-08!3;UBERON:0001869!5.15e-08!32;UBERON:0001896!6.67e-08!3;UBERON:0005290!6.67e-08!3;UBERON:0010096!6.67e-08!3;UBERON:0002791!9.36e-08!33;UBERON:0000033!1.38e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.19e-13;49!UBERON:0000341;1.12e-11;2!UBERON:0005090;1.95e-11;2!UBERON:0001630;1.95e-11;2!UBERON:0002148;3.55e-11;2!UBERON:0006331;3.55e-11;2!UBERON:0009662;3.55e-11;2!UBERON:0001723;2.49e-08;3!UBERON:0001033;2.49e-08;3!UBERON:0002298;4.24e-08;6!UBERON:0000988;9.89e-08;3!UBERON:0002426;6.96e-07;1!UBERON:0003831;6.96e-07;1!UBERON:0003898;6.96e-07;1!UBERON:0004830;6.96e-07;1!UBERON:0003830;6.96e-07;1!UBERON:0005175;6.96e-07;1!UBERON:0001774;6.96e-07;1!UBERON:0001103;6.96e-07;1!UBERON:0007029;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,9.31e-12,2;UBERON:0005090,2.28e-11,2;UBERON:0001630,2.28e-11,2;UBERON:0002148,2.67e-11,2;UBERON:0006331,2.67e-11,2;UBERON:0009662,2.67e-11,2;UBERON:0001723,2.49e-08,3;UBERON:0001033,2.49e-08,3;UBERON:0010056,2.49e-08,3;UBERON:0002298,3.43e-08,6;UBERON:0000988,8.19e-08,3;UBERON:0002426,6.96e-07,1;UBERON:0003831,6.96e-07,1;UBERON:0003898,6.96e-07,1;UBERON:0004830,6.96e-07,1;UBERON:0003830,6.96e-07,1;UBERON:0005175,6.96e-07,1;UBERON:0001774,6.96e-07,1;UBERON:0001103,6.96e-07,1;UBERON:0010084,6.96e-07,1;UBERON:0007029,7.77e-07,1 | |||
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| ||
|short_description=p13@GNAS | |||
}} | }} |
Latest revision as of 06:06, 17 September 2015
Short description: | p13@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GNAS_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 149bp_to_ENST00000481768_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.30e-16 | 5 |
Ontology term | p-value | n |
---|---|---|
throat | 9.31e-12 | 2 |
muscle structure | 2.28e-11 | 2 |
muscle organ | 2.28e-11 | 2 |
locus ceruleus | 2.67e-11 | 2 |
brainstem nucleus | 2.67e-11 | 2 |
hindbrain nucleus | 2.67e-11 | 2 |
tongue | 2.49e-08 | 3 |
gustatory system | 2.49e-08 | 3 |
future tongue | 2.49e-08 | 3 |
brainstem | 3.43e-08 | 6 |
pons | 8.19e-08 | 3 |
chest muscle | 6.96e-07 | 1 |
respiratory system muscle | 6.96e-07 | 1 |
skeletal muscle of trunk | 6.96e-07 | 1 |
respiratory system skeletal muscle | 6.96e-07 | 1 |
thoracic segment muscle | 6.96e-07 | 1 |
chest organ | 6.96e-07 | 1 |
muscle of trunk | 6.96e-07 | 1 |
diaphragm | 6.96e-07 | 1 |
future diaphragm | 6.96e-07 | 1 |
surface | 7.77e-07 | 1 |