FFCP PHASE1:Hg19::chr22:33257584..33257646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_AF035289_5end | |association_with_transcript=4bp_to_AF035289_5end | ||
|cluster_id=chr22:33257584..33257646,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_11_at_TIMP3_5end | |description=CAGE_peak_11_at_TIMP3_5end | ||
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|ontology_enrichment_celltype=CL:0000057!4.49e-08!75;CL:0000055!6.61e-08!180;CL:0002334!7.15e-07!12 | |ontology_enrichment_celltype=CL:0000057!4.49e-08!75;CL:0000055!6.61e-08!180;CL:0002334!7.15e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.64e-10;12!CL:0000349;1.38e-07;19!CL:0002541;4.39e-07;3 | |ontology_enrichment_celltype_v019=CL:0002334;1.64e-10;12!CL:0000349;1.38e-07;19!CL:0002541;4.39e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.16e-10,12;CL:0000057,3.65e-08,76;CL:0000136,7.46e-08,15;CL:0000349,1.12e-07,19;CL:0002541,4.39e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!4.45e-10!57;UBERON:0002199!4.00e-08!45;UBERON:0002416!4.00e-08!45;UBERON:0003102!4.21e-08!95;UBERON:0005631!2.12e-07!14;UBERON:0000158!2.12e-07!14;UBERON:0000475!8.39e-07!365;UBERON:0002097!8.56e-07!40 | |ontology_enrichment_uberon=UBERON:0004923!4.45e-10!57;UBERON:0002199!4.00e-08!45;UBERON:0002416!4.00e-08!45;UBERON:0003102!4.21e-08!95;UBERON:0005631!2.12e-07!14;UBERON:0000158!2.12e-07!14;UBERON:0000475!8.39e-07!365;UBERON:0002097!8.56e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.70e-12;9!UBERON:0000042;5.70e-12;9!UBERON:0005631;4.00e-11;10!UBERON:0000158;4.00e-11;10!UBERON:0003688;1.14e-10;6!UBERON:0002358;1.14e-10;6!UBERON:0003684;1.14e-10;6!UBERON:0001178;1.14e-10;6!UBERON:0003124;4.39e-07;3!UBERON:0000920;4.39e-07;3!UBERON:0001013;7.07e-07;14!UBERON:0000478;7.24e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0004457;5.70e-12;9!UBERON:0000042;5.70e-12;9!UBERON:0005631;4.00e-11;10!UBERON:0000158;4.00e-11;10!UBERON:0003688;1.14e-10;6!UBERON:0002358;1.14e-10;6!UBERON:0003684;1.14e-10;6!UBERON:0001178;1.14e-10;6!UBERON:0003124;4.39e-07;3!UBERON:0000920;4.39e-07;3!UBERON:0001013;7.07e-07;14!UBERON:0000478;7.24e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,5.24e-14,66;UBERON:0005631,7.16e-14,14;UBERON:0000158,7.16e-14,14;UBERON:0003688,1.13e-10,6;UBERON:0002358,1.13e-10,6;UBERON:0003684,1.13e-10,6;UBERON:0001178,1.13e-10,6;UBERON:0004457,1.92e-10,12;UBERON:0000042,1.92e-10,12;UBERON:0003124,2.46e-09,7;UBERON:0000920,4.39e-07,3;UBERON:0000478,6.06e-07,24;UBERON:0001013,6.25e-07,14 | |||
|phase1_expression=0.726713517082227,1.07050261945492,1.12763523276777,10.007329835313,3.5756887554183,9.59572376510406,2.53299878168311,0.631719873426831,0,0.245733936501509,0,2.40285509343189,1.31883489114227,0,0,0,1.80808358407193,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0.361439152384566,0,0.579386075843295,0,12.6525066278685,0.0945348171640679,0,0,0.654895377488563,0.728590576585084,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,4.96971951695318,1.01304409331664,0.132409180813219,2.58152958673932,0,1.68203280042692,0,0.74000264525148,0,0,0,0,0,2.10889288650417,0,0,0.149448680551801,0,0.323745888736263,0,0.408308342509787,0.122834317311768,0.413303124703062,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0,0,0,0,0.45071417671979,0.340296549480063,2.15267562826634,0.640672166455702,1.90738711043606,3.30100205692843,0.515262646192195,2.06112432036503,2.23340227597908,2.02531598689519,0.389748020644795,1.51460264546469,0.736399189138395,2.26304479546337,2.4850671476163,0.403008392910561,0.339121184620975,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.928735856063958,0,0,0,0.241011029883482,0,0,0,0,0,0,2.21446636387394,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0.201057944823262,0.0925884451585296,2.28065813717227,0,1.44331342025273,0,0,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.53735113621709,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0.763976851116555,0,1.71072446022705,1.64523988325318,3.90445975197093,0.285826432630578,0.784917590417525,0,0.51336800074665,0.646358578788889,0,0.845302752556,0,0,0,0,0,0,0,0,0.977208552881205,0.710783897485092,0,0.301439377059586,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,1.24900292158013,0.315404830067869,0,1.20378439891088,0,1.03473071292505,1.32845119707087,0.921845842708516,0.781952530212746,2.15381273209015,1.02943027143257,0,0,0,0.606255142892519,1.66435439510497,1.5119514666484,3.2254015016441,1.53461973288062,1.68396056659844,1.79394808957981,4.60536524160033,5.14732547659544,5.93672265779964,2.31314540703983,3.01854933032316,0.164254312027618,0,0.929683027679674,0.362578348774867,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.131124414959424,0,0,0,0,0,2.27466768141793,0.170093705276516,0.863663664408557,3.08454505380579,0,0,0,0,0.223874754722178,0,0,1.53870075069834,0.984043937099117,2.27764876265012,0.618246069886334,0,0,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0.170453254832202,0.445160178233687,0.330569830721956,0,0,0.50578890427775,2.78907329578371,6.92587163027408,0.6970372701606,0,1.06461206063404,0,0,0,0.372158369359667,0,0,0.767693373934002,7.70290178461057,0.318203247925937,0.78494864019923,0.179872457583315,0,0,0.404364963146632,1.58510321173008,0.842516912477962,0,3.65570234446927,10.5650146756755,0,0.707027159768564,0,0.551365343546124,0.66343897524122,0.438450885253763,0,2.62357900818653,0.608731130888112,0.92947049429925,0,0,0.294747123039363,0.35667105148125,0,2.11107635297664,3.62224382255892,0,1.04980416073495,0,0,0,0.753150406214233,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,12.4147132063599,1.78178808499583,11.9792673818701,0,0.140669416410513,0,0,0.63337622438398,0.996239941255349,0,0,0.306806047506464,0,8.08702927920699,0,0,0,0.986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0.724999575434793,0,0,0.709163045303809,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0.41827123283581,1.07730361905316,0.227884111694002,0.23056390438806,0,0.108647371922008,35.0901275705111,5.77064838431733,79.4221816267766,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,0.821425535170343,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,2.62090002363045,0,0,0,0,0.969890164884194,0,2.03382666702479,0,0,0,0.195551382734803,0,1.28071796843612,1.39866726707491,0,0,0,0,0,0.235694034616795,0,0,0.407992870545287,0,0,0.136905378891993,0,0.859530882839914,0,16.7569440763353,1.83328339209347,0,0.599037001496973,3.004582336956,0.89268582976749,0.604651252380536,0.360299883542404,0,0.0787831823072236,0,0,0,0.169346664131569,0,0.544813624446302,0,0,0,0,0.77380195455795,0,0.3354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| ||
|short_description=p11@TIMP3 | |short_description=p11@TIMP3 | ||
}} | }} |
Latest revision as of 22:55, 19 September 2015
Short description: | p11@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 4bp_to_AF035289_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.16e-10 | 12 |
fibroblast | 3.65e-08 | 76 |
fat cell | 7.46e-08 | 15 |
extraembryonic cell | 1.12e-07 | 19 |
chorionic membrane mesenchymal stem cell | 4.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 5.24e-14 | 66 |
extraembryonic membrane | 7.16e-14 | 14 |
membranous layer | 7.16e-14 | 14 |
omentum | 1.13e-10 | 6 |
peritoneum | 1.13e-10 | 6 |
abdominal cavity | 1.13e-10 | 6 |
visceral peritoneum | 1.13e-10 | 6 |
cavity lining | 1.92e-10 | 12 |
serous membrane | 1.92e-10 | 12 |
chorion | 2.46e-09 | 7 |
egg chorion | 4.39e-07 | 3 |
extraembryonic structure | 6.06e-07 | 24 |
adipose tissue | 6.25e-07 | 14 |