FFCP PHASE1:Hg19::chr1:243858974..243858986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10000 | |EntrezGene=10000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=393 | |HGNC=393 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000491219_5end | |association_with_transcript=31bp_to_ENST00000491219_5end | ||
|cluster_id=chr1:243858974..243858986,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_21_at_AKT3_5end | |description=CAGE_peak_21_at_AKT3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.35e-11;2 | |ontology_enrichment_celltype_v019=CL:0000047;3.35e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.30e-11,8 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.16e-21;1 | |ontology_enrichment_development_v019=UBERON:0000358;5.16e-21;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p21@AKT3 | |short_description=p21@AKT3 | ||
}} | }} |
Latest revision as of 19:59, 16 September 2015
Short description: | p21@AKT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_AKT3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 31bp_to_ENST00000491219_5end |
EntrezGene: | AKT3 |
HGNC: | 393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.30e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.43e-21 | 1 |
parietal lobe | 5.91e-17 | 5 |
neocortex | 1.26e-15 | 20 |
regional part of cerebral cortex | 2.65e-14 | 22 |
cerebral cortex | 1.07e-12 | 25 |
pallium | 1.07e-12 | 25 |
regional part of telencephalon | 4.42e-10 | 32 |
cerebral hemisphere | 4.42e-10 | 32 |
brain grey matter | 1.60e-09 | 34 |
gray matter | 1.60e-09 | 34 |
telencephalon | 1.60e-09 | 34 |
central nervous system | 1.44e-08 | 81 |
duodenum | 4.52e-08 | 2 |
regional part of forebrain | 5.48e-08 | 41 |
forebrain | 5.48e-08 | 41 |
anterior neural tube | 5.48e-08 | 41 |
future forebrain | 5.48e-08 | 41 |
nervous system | 1.03e-07 | 89 |