FFCP PHASE1:Hg19::chr6:10556451..10556476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q06430 | |UniProt=Q06430 | ||
|association_with_transcript=211bp_to_ENST00000316170_5end | |association_with_transcript=211bp_to_ENST00000316170_5end | ||
|cluster_id=chr6:10556451..10556476,+ | |||
|description=CAGE_peak_8_at_GCNT2_5end | |description=CAGE_peak_8_at_GCNT2_5end | ||
|id=chr6:10556451..10556476,+ | |id=chr6:10556451..10556476,+ | ||
|ontology_enrichment_celltype=CL:0000047!1.26e-11!8;CL:0002139!6.07e-10!24;CL:0002319!1.27e-09!25;CL:0000540!1.70e-09!6;CL:0000031!1.70e-09!6;CL:0000404!1.70e-09!6;CL:0002322!4.44e-09!5;CL:0000133!7.67e-09!59;CL:0000071!5.07e-07!18;CL:0002546!5.07e-07!18 | |ontology_enrichment_celltype=CL:0000047!1.26e-11!8;CL:0002139!6.07e-10!24;CL:0002319!1.27e-09!25;CL:0000540!1.70e-09!6;CL:0000031!1.70e-09!6;CL:0000404!1.70e-09!6;CL:0002322!4.44e-09!5;CL:0000133!7.67e-09!59;CL:0000071!5.07e-07!18;CL:0002546!5.07e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.08e-19;5!CL:0002144;5.81e-12;3!CL:0000540;1.73e-10;6!CL:0000404;1.73e-10;6!CL:0002138;8.16e-10;6!CL:0000039;8.40e-09;7!CL:0000586;8.40e-09;7!CL:0002321;1.01e-08;15!CL:0002139;2.17e-08;24 | |ontology_enrichment_celltype_v019=CL:0002322;1.08e-19;5!CL:0002144;5.81e-12;3!CL:0000540;1.73e-10;6!CL:0000404;1.73e-10;6!CL:0002138;8.16e-10;6!CL:0000039;8.40e-09;7!CL:0000586;8.40e-09;7!CL:0002321;1.01e-08;15!CL:0002139;2.17e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.10e-19,5;CL:0002144,6.39e-12,3;CL:0000047,1.08e-11,8;CL:0000540,1.91e-10,6;CL:0000031,1.91e-10,6;CL:0000404,1.91e-10,6;CL:0005020,7.54e-10,6;CL:0002138,7.54e-10,6;CL:0005022,7.54e-10,6;CL:0000039,1.05e-08,7;CL:0000586,1.05e-08,7;CL:0002139,2.12e-08,24;CL:0000133,2.08e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.73e-10;6!CL:0005022;8.16e-10;6 | |ontology_enrichment_development_v019=CL:0000031;1.73e-10;6!CL:0005022;8.16e-10;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000922;3.86e-23;49!UBERON:0010523;5.81e-12;3!UBERON:0001915;5.81e-12;3!UBERON:0001982;5.81e-12;3!UBERON:0000160;1.79e-08;17!UBERON:0000473;1.06e-07;8!UBERON:0001473;2.29e-07;8!UBERON:0004536;2.29e-07;8!UBERON:0006558;2.29e-07;8!UBERON:0002108;8.24e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000922;3.86e-23;49!UBERON:0010523;5.81e-12;3!UBERON:0001915;5.81e-12;3!UBERON:0001982;5.81e-12;3!UBERON:0000160;1.79e-08;17!UBERON:0000473;1.06e-07;8!UBERON:0001473;2.29e-07;8!UBERON:0004536;2.29e-07;8!UBERON:0006558;2.29e-07;8!UBERON:0002108;8.24e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.39e-12,3;UBERON:0001915,6.39e-12,3;UBERON:0001982,6.39e-12,3;UBERON:0000160,2.00e-08,17;UBERON:0000473,1.29e-07,8;UBERON:0001473,2.16e-07,8;UBERON:0004536,2.16e-07,8;UBERON:0006558,2.16e-07,8;UBERON:0002108,9.42e-07,4 | |||
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| ||
|short_description=p8@GCNT2 | |short_description=p8@GCNT2 | ||
}} | }} |
Latest revision as of 14:04, 19 September 2015
Short description: | p8@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 211bp_to_ENST00000316170_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q06430 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.10e-19 | 5 |
capillary endothelial cell | 6.39e-12 | 3 |
neuronal stem cell | 1.08e-11 | 8 |
neuron | 1.91e-10 | 6 |
neuroblast | 1.91e-10 | 6 |
electrically signaling cell | 1.91e-10 | 6 |
lymphangioblast | 7.54e-10 | 6 |
endothelial cell of lymphatic vessel | 7.54e-10 | 6 |
vascular lymphangioblast | 7.54e-10 | 6 |
germ line cell | 1.05e-08 | 7 |
germ cell | 1.05e-08 | 7 |
endothelial cell of vascular tree | 2.12e-08 | 24 |
neurectodermal cell | 2.08e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 6.39e-12 | 3 |
endothelium of capillary | 6.39e-12 | 3 |
capillary | 6.39e-12 | 3 |
intestine | 2.00e-08 | 17 |
testis | 1.29e-07 | 8 |
lymphatic vessel | 2.16e-07 | 8 |
lymph vasculature | 2.16e-07 | 8 |
lymphatic part of lymphoid system | 2.16e-07 | 8 |
small intestine | 9.42e-07 | 4 |