FFCP PHASE1:Hg19::chr6:28554977..28554988,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114821 | |EntrezGene=114821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13851 | |HGNC=13851 | ||
|TSSclassifier=strong | |||
|UniProt=Q6R2W3 | |UniProt=Q6R2W3 | ||
|association_with_transcript=123bp_to_ENST00000452236,NM_052923,uc003nlo.2_5end | |association_with_transcript=123bp_to_ENST00000452236,NM_052923,uc003nlo.2_5end | ||
|cluster_id=chr6:28554977..28554988,- | |||
|description=CAGE_peak_5_at_SCAND3_5end | |description=CAGE_peak_5_at_SCAND3_5end | ||
|id=chr6:28554977..28554988,- | |id=chr6:28554977..28554988,- | ||
|ontology_enrichment_celltype=CL:0000066!5.74e-07!254 | |ontology_enrichment_celltype=CL:0000066!5.74e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.91e-15;2 | |ontology_enrichment_celltype_v019=CL:0002535;1.91e-15;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.18e-12;10!UBERON:0007687;2.18e-12;10!UBERON:0003056;9.43e-11;3 | |ontology_enrichment_development_v019=UBERON:0003918;2.18e-12;10!UBERON:0007687;2.18e-12;10!UBERON:0003056;9.43e-11;3 | ||
|ontology_enrichment_disease=DOID:0050687!1.05e-12!143;DOID:305!8.11e-12!106;DOID:162!1.39e-07!235;DOID:14566!3.88e-07!239 | |ontology_enrichment_disease=DOID:0050687!1.05e-12!143;DOID:305!8.11e-12!106;DOID:162!1.39e-07!235;DOID:14566!3.88e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4362;5.86e-07;5 | |ontology_enrichment_disease_v019=DOID:4362;5.86e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,6.77e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0002114;9.43e-11;2!UBERON:0002108;5.86e-07;4!UBERON:0000966;5.86e-07;5!UBERON:0002021;5.86e-07;5!UBERON:0005388;5.86e-07;5!UBERON:0001802;5.86e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0002114;9.43e-11;2!UBERON:0002108;5.86e-07;4!UBERON:0000966;5.86e-07;5!UBERON:0002021;5.86e-07;5!UBERON:0005388;5.86e-07;5!UBERON:0001802;5.86e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.74e-15,2;UBERON:0004801,2.74e-15,2;UBERON:0002114,9.90e-11,2;UBERON:0002021,5.08e-07,5;UBERON:0002108,6.04e-07,4 | |||
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| ||
|short_description=p5@SCAND3 | |short_description=p5@SCAND3 | ||
}} | }} |
Latest revision as of 12:51, 17 September 2015
Short description: | p5@SCAND3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCAND3_5end |
Coexpression cluster: | NA |
Association with transcript: | 123bp_to_ENST00000452236, NM_052923, uc003nlo.2_5end |
EntrezGene: | SCAND3 |
HGNC: | 13851 |
UniProt: | Q6R2W3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.74e-15 | 2 |
cervix epithelium | 2.74e-15 | 2 |
duodenum | 9.90e-11 | 2 |
occipital lobe | 5.08e-07 | 5 |
small intestine | 6.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.77e-07 | 5 |