FFCP PHASE1:Hg19::chr5:130581217..130581227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56990 | |EntrezGene=56990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18547 | |HGNC=18547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000502840_5end | |association_with_transcript=31bp_to_ENST00000502840_5end | ||
|cluster_id=chr5:130581217..130581227,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_35_at_CDC42SE2_5end | |description=CAGE_peak_35_at_CDC42SE2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!7.62e-26!1;UBERON:0003135!6.11e-21!11;UBERON:0000473!1.94e-13!8;UBERON:0003101!7.66e-11!22;UBERON:0000079!7.66e-11!22;UBERON:0006947!1.54e-09!3;UBERON:0004054!1.54e-09!3;UBERON:0005904!1.80e-07!4 | |ontology_enrichment_uberon=UBERON:0001301!7.62e-26!1;UBERON:0003135!6.11e-21!11;UBERON:0000473!1.94e-13!8;UBERON:0003101!7.66e-11!22;UBERON:0000079!7.66e-11!22;UBERON:0006947!1.54e-09!3;UBERON:0004054!1.54e-09!3;UBERON:0005904!1.80e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.88e-23;17!UBERON:0002108;4.66e-21;4!UBERON:0005409;2.02e-18;22!UBERON:0004921;1.77e-12;33!UBERON:0001155;2.31e-12;9!UBERON:0000059;2.27e-10;11!UBERON:0001135;5.74e-08;15!UBERON:0001555;1.47e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0000160;3.88e-23;17!UBERON:0002108;4.66e-21;4!UBERON:0005409;2.02e-18;22!UBERON:0004921;1.77e-12;33!UBERON:0001155;2.31e-12;9!UBERON:0000059;2.27e-10;11!UBERON:0001135;5.74e-08;15!UBERON:0001555;1.47e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.88e-23,17;UBERON:0002108,5.15e-21,4;UBERON:0005409,1.86e-16,25;UBERON:0001155,2.19e-12,9;UBERON:0000059,2.16e-10,11;UBERON:0001135,5.93e-08,15 | |||
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|short_description=p35@CDC42SE2 | |short_description=p35@CDC42SE2 | ||
}} | }} |
Latest revision as of 03:30, 20 September 2015
Short description: | p35@CDC42SE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_CDC42SE2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 31bp_to_ENST00000502840_5end |
EntrezGene: | CDC42SE2 |
HGNC: | 18547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.88e-23 | 17 |
small intestine | 5.15e-21 | 4 |
gastrointestinal system | 1.86e-16 | 25 |
colon | 2.19e-12 | 9 |
large intestine | 2.16e-10 | 11 |
smooth muscle tissue | 5.93e-08 | 15 |