FFCP PHASE1:Hg19::chr17:37825180..37825196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:37825180..37825196,+ | |||
|coexpression_cluster_id=C477 | |coexpression_cluster_id=C477 | ||
|description=CAGE_peak_at_chr17:37825180..37825196,+ | |description=CAGE_peak_at_chr17:37825180..37825196,+ | ||
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|ontology_enrichment_celltype=CL:0002536!9.18e-19!2;CL:0002575!2.43e-18!2;CL:0002541!4.89e-13!3;CL:0000669!7.01e-08!5 | |ontology_enrichment_celltype=CL:0002536!9.18e-19!2;CL:0002575!2.43e-18!2;CL:0002541!4.89e-13!3;CL:0000669!7.01e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.09e-44;3!CL:0000349;2.67e-28;19!CL:0002536;9.86e-18;2!CL:0002569;7.17e-07;6 | |ontology_enrichment_celltype_v019=CL:0002541;1.09e-44;3!CL:0000349;2.67e-28;19!CL:0002536;9.86e-18;2!CL:0002569;7.17e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-44,3;CL:0000349,3.07e-28,19;CL:0002536,1.27e-17,2;CL:0002569,7.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.97e-34;1!UBERON:0007297;9.86e-18;2 | |ontology_enrichment_development_v019=UBERON:0005754;5.97e-34;1!UBERON:0007297;9.86e-18;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003124;1.09e-44;3!UBERON:0000920;1.09e-44;3!UBERON:0001874;5.97e-34;1!UBERON:0000998;5.97e-34;1!UBERON:0006868;5.97e-34;1!UBERON:0005631;2.78e-30;10!UBERON:0000158;2.78e-30;10!UBERON:0000478;1.46e-22;24!UBERON:0006947;2.74e-12;3!UBERON:0005383;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005382;2.74e-12;3!UBERON:0000369;1.50e-09;4!UBERON:0002435;1.50e-09;4!UBERON:0005904;1.50e-09;4!UBERON:0000204;1.50e-09;4!UBERON:0003422;7.17e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0003124;1.09e-44;3!UBERON:0000920;1.09e-44;3!UBERON:0001874;5.97e-34;1!UBERON:0000998;5.97e-34;1!UBERON:0006868;5.97e-34;1!UBERON:0005631;2.78e-30;10!UBERON:0000158;2.78e-30;10!UBERON:0000478;1.46e-22;24!UBERON:0006947;2.74e-12;3!UBERON:0005383;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005382;2.74e-12;3!UBERON:0000369;1.50e-09;4!UBERON:0002435;1.50e-09;4!UBERON:0005904;1.50e-09;4!UBERON:0000204;1.50e-09;4!UBERON:0003422;7.17e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.22e-44,3;UBERON:0000998,3.61e-34,1;UBERON:0006868,3.61e-34,1;UBERON:0001874,5.05e-34,1;UBERON:0000478,1.63e-22,24;UBERON:0005631,7.70e-22,14;UBERON:0000158,7.70e-22,14;UBERON:0003124,7.84e-20,7;UBERON:0006947,2.31e-12,3;UBERON:0004054,2.31e-12,3;UBERON:0005383,2.59e-12,3;UBERON:0005382,2.59e-12,3;UBERON:0005904,1.32e-09,4;UBERON:0000369,1.44e-09,4;UBERON:0002435,1.44e-09,4;UBERON:0000204,1.44e-09,4;UBERON:0010082,1.44e-09,4;UBERON:0003422,7.17e-07,6 | |||
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|short_description=p@chr17:37825180..37825196,+ | |short_description=p@chr17:37825180..37825196,+ | ||
}} | }} |
Latest revision as of 16:11, 25 July 2015
Short description: | p@chr17:37825180..37825196, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:37825180..37825196, + |
Coexpression cluster: | C477_Mesenchymal_Amniotic_Placental_chorionic_umbilical_Cardiac_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-44 | 3 |
extraembryonic cell | 3.07e-28 | 19 |
amniotic epithelial cell | 1.27e-17 | 2 |
mesenchymal stem cell of umbilical cord | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.22e-44 | 3 |
seminal vesicle | 3.61e-34 | 1 |
seminal fluid secreting gland | 3.61e-34 | 1 |
putamen | 5.05e-34 | 1 |
extraembryonic structure | 1.63e-22 | 24 |
extraembryonic membrane | 7.70e-22 | 14 |
membranous layer | 7.70e-22 | 14 |
chorion | 7.84e-20 | 7 |
male genital duct | 2.31e-12 | 3 |
internal male genitalia | 2.31e-12 | 3 |
caudate-putamen | 2.59e-12 | 3 |
dorsal striatum | 2.59e-12 | 3 |
duct of male reproductive system | 1.32e-09 | 4 |
corpus striatum | 1.44e-09 | 4 |
striatum | 1.44e-09 | 4 |
ventral part of telencephalon | 1.44e-09 | 4 |
future corpus striatum | 1.44e-09 | 4 |
mesenchyme of umbilical cord | 7.17e-07 | 6 |