FFCP PHASE1:Hg19::chr12:49297899..49297955,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85478 | |EntrezGene=85478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29937 | |HGNC=29937 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXS2,F8W0R6,F8VR42 | |UniProt=Q8IXS2,F8W0R6,F8VR42 | ||
|association_with_transcript=0bp_to_ENST00000320516,ENST00000547861,ENST00000552942_5end | |association_with_transcript=0bp_to_ENST00000320516,ENST00000547861,ENST00000552942_5end | ||
|cluster_id=chr12:49297899..49297955,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_CCDC65_5end | |description=CAGE_peak_1_at_CCDC65_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.62e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.62e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.00e-21!57;UBERON:0005068!4.00e-21!57;UBERON:0006241!4.00e-21!57;UBERON:0007135!4.00e-21!57;UBERON:0000073!1.03e-20!94;UBERON:0001016!1.03e-20!94;UBERON:0005743!9.92e-20!86;UBERON:0001017!3.50e-19!82;UBERON:0002780!5.78e-19!41;UBERON:0001890!5.78e-19!41;UBERON:0006240!5.78e-19!41;UBERON:0003080!4.53e-18!42;UBERON:0002616!8.87e-18!59;UBERON:0000955!1.00e-17!69;UBERON:0006238!1.00e-17!69;UBERON:0003075!4.44e-16!86;UBERON:0007284!4.44e-16!86;UBERON:0001893!6.81e-16!34;UBERON:0002020!7.44e-16!34;UBERON:0003528!7.44e-16!34;UBERON:0002346!9.92e-16!90;UBERON:0002791!3.22e-15!33;UBERON:0001869!4.12e-15!32;UBERON:0007023!1.20e-13!115;UBERON:0003056!2.09e-13!61;UBERON:0004121!6.24e-13!169;UBERON:0000924!6.99e-13!173;UBERON:0006601!6.99e-13!173;UBERON:0000153!1.32e-11!129;UBERON:0007811!1.32e-11!129;UBERON:0000033!2.30e-11!123;UBERON:0000956!5.86e-11!25;UBERON:0000203!5.86e-11!25;UBERON:0002619!9.64e-11!22;UBERON:0000475!1.24e-10!365;UBERON:0001950!1.23e-09!20;UBERON:0000025!4.50e-09!194;UBERON:0000119!4.50e-08!312;UBERON:0004111!8.27e-08!241;UBERON:0000483!1.38e-07!309;UBERON:0000477!4.61e-07!286 | |ontology_enrichment_uberon=UBERON:0001049!4.00e-21!57;UBERON:0005068!4.00e-21!57;UBERON:0006241!4.00e-21!57;UBERON:0007135!4.00e-21!57;UBERON:0000073!1.03e-20!94;UBERON:0001016!1.03e-20!94;UBERON:0005743!9.92e-20!86;UBERON:0001017!3.50e-19!82;UBERON:0002780!5.78e-19!41;UBERON:0001890!5.78e-19!41;UBERON:0006240!5.78e-19!41;UBERON:0003080!4.53e-18!42;UBERON:0002616!8.87e-18!59;UBERON:0000955!1.00e-17!69;UBERON:0006238!1.00e-17!69;UBERON:0003075!4.44e-16!86;UBERON:0007284!4.44e-16!86;UBERON:0001893!6.81e-16!34;UBERON:0002020!7.44e-16!34;UBERON:0003528!7.44e-16!34;UBERON:0002346!9.92e-16!90;UBERON:0002791!3.22e-15!33;UBERON:0001869!4.12e-15!32;UBERON:0007023!1.20e-13!115;UBERON:0003056!2.09e-13!61;UBERON:0004121!6.24e-13!169;UBERON:0000924!6.99e-13!173;UBERON:0006601!6.99e-13!173;UBERON:0000153!1.32e-11!129;UBERON:0007811!1.32e-11!129;UBERON:0000033!2.30e-11!123;UBERON:0000956!5.86e-11!25;UBERON:0000203!5.86e-11!25;UBERON:0002619!9.64e-11!22;UBERON:0000475!1.24e-10!365;UBERON:0001950!1.23e-09!20;UBERON:0000025!4.50e-09!194;UBERON:0000119!4.50e-08!312;UBERON:0004111!8.27e-08!241;UBERON:0000483!1.38e-07!309;UBERON:0000477!4.61e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.18e-20;53!UBERON:0002616;1.18e-20;53!UBERON:0002780;1.20e-20;41!UBERON:0001890;1.20e-20;41!UBERON:0003528;1.58e-18;34!UBERON:0002020;1.58e-18;34!UBERON:0001893;1.18e-17;34!UBERON:0001869;7.20e-17;32!UBERON:0002791;1.60e-15;32!UBERON:0002619;2.59e-15;22!UBERON:0002298;1.05e-14;6!UBERON:0001950;1.75e-14;20!UBERON:0000955;2.54e-14;68!UBERON:0001017;4.90e-14;75!UBERON:0000956;3.74e-13;25!UBERON:0000203;3.74e-13;25!UBERON:0001894;9.57e-12;7!UBERON:0001016;3.73e-11;83!UBERON:0007023;8.09e-11;114!UBERON:0000369;2.45e-10;4!UBERON:0002435;2.45e-10;4!UBERON:0000204;2.45e-10;4!UBERON:0000125;1.87e-09;9!UBERON:0002308;1.87e-09;9!UBERON:0000200;5.56e-09;6!UBERON:0001896;1.13e-08;3!UBERON:0005290;1.13e-08;3!UBERON:0004732;2.70e-08;13!UBERON:0005383;4.00e-08;3!UBERON:0005382;4.00e-08;3!UBERON:0000988;1.00e-07;3!UBERON:0001871;1.94e-07;6!UBERON:0004733;6.51e-07;12!UBERON:0002028;6.51e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0000073;1.18e-20;53!UBERON:0002616;1.18e-20;53!UBERON:0002780;1.20e-20;41!UBERON:0001890;1.20e-20;41!UBERON:0003528;1.58e-18;34!UBERON:0002020;1.58e-18;34!UBERON:0001893;1.18e-17;34!UBERON:0001869;7.20e-17;32!UBERON:0002791;1.60e-15;32!UBERON:0002619;2.59e-15;22!UBERON:0002298;1.05e-14;6!UBERON:0001950;1.75e-14;20!UBERON:0000955;2.54e-14;68!UBERON:0001017;4.90e-14;75!UBERON:0000956;3.74e-13;25!UBERON:0000203;3.74e-13;25!UBERON:0001894;9.57e-12;7!UBERON:0001016;3.73e-11;83!UBERON:0007023;8.09e-11;114!UBERON:0000369;2.45e-10;4!UBERON:0002435;2.45e-10;4!UBERON:0000204;2.45e-10;4!UBERON:0000125;1.87e-09;9!UBERON:0002308;1.87e-09;9!UBERON:0000200;5.56e-09;6!UBERON:0001896;1.13e-08;3!UBERON:0005290;1.13e-08;3!UBERON:0004732;2.70e-08;13!UBERON:0005383;4.00e-08;3!UBERON:0005382;4.00e-08;3!UBERON:0000988;1.00e-07;3!UBERON:0001871;1.94e-07;6!UBERON:0004733;6.51e-07;12!UBERON:0002028;6.51e-07;12 | ||
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| ||
|short_description=p1@CCDC65 | |short_description=p1@CCDC65 | ||
}} | }} |
Latest revision as of 14:38, 18 September 2015
Short description: | p1@CCDC65 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC65_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000320516, ENST00000547861, ENST00000552942_5end |
EntrezGene: | CCDC65 |
HGNC: | 29937 |
UniProt: | Q8IXS2F8W0R6F8VR42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data