FFCP PHASE1:Hg19::chr12:120189930..120189977,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11113 | |EntrezGene=11113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1985 | |HGNC=1985 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4K4 | |UniProt=F5H4K4 | ||
|association_with_transcript=-30bp_to_ENST00000546026_5end | |association_with_transcript=-30bp_to_ENST00000546026_5end | ||
|cluster_id=chr12:120189930..120189977,- | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_7_at_CIT_5end | |description=CAGE_peak_7_at_CIT_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.83e-14;3!CL:1000615;1.83e-14;3!CL:0002306;1.83e-14;3 | |ontology_enrichment_celltype_v019=CL:0000239;1.83e-14;3!CL:1000615;1.83e-14;3!CL:0002306;1.83e-14;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.60e-14,3;CL:1000615,1.60e-14,3;CL:0002306,1.60e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.90e-17;10!UBERON:0007687;5.90e-17;10 | |ontology_enrichment_development_v019=UBERON:0003918;5.90e-17;10!UBERON:0007687;5.90e-17;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.32e-14!22;UBERON:0001950!2.52e-14!20;UBERON:0001049!5.38e-14!57;UBERON:0005068!5.38e-14!57;UBERON:0006241!5.38e-14!57;UBERON:0007135!5.38e-14!57;UBERON:0002780!7.74e-14!41;UBERON:0001890!7.74e-14!41;UBERON:0006240!7.74e-14!41;UBERON:0003080!2.26e-13!42;UBERON:0002616!2.81e-13!59;UBERON:0003056!8.73e-13!61;UBERON:0000956!1.98e-12!25;UBERON:0000203!1.98e-12!25;UBERON:0003075!2.33e-12!86;UBERON:0007284!2.33e-12!86;UBERON:0002020!2.63e-12!34;UBERON:0003528!2.63e-12!34;UBERON:0001893!3.28e-12!34;UBERON:0000955!5.88e-12!69;UBERON:0006238!5.88e-12!69;UBERON:0001869!7.10e-12!32;UBERON:0002346!2.00e-11!90;UBERON:0002791!4.10e-11!33;UBERON:0005743!5.63e-11!86;UBERON:0001017!6.95e-11!82;UBERON:0000073!6.29e-10!94;UBERON:0001016!6.29e-10!94;UBERON:0000033!1.01e-09!123;UBERON:0000153!1.43e-09!129;UBERON:0007811!1.43e-09!129;UBERON:0007023!1.20e-08!115;UBERON:0000200!2.45e-08!6;UBERON:0002771!9.54e-07!3 | |ontology_enrichment_uberon=UBERON:0002619!1.32e-14!22;UBERON:0001950!2.52e-14!20;UBERON:0001049!5.38e-14!57;UBERON:0005068!5.38e-14!57;UBERON:0006241!5.38e-14!57;UBERON:0007135!5.38e-14!57;UBERON:0002780!7.74e-14!41;UBERON:0001890!7.74e-14!41;UBERON:0006240!7.74e-14!41;UBERON:0003080!2.26e-13!42;UBERON:0002616!2.81e-13!59;UBERON:0003056!8.73e-13!61;UBERON:0000956!1.98e-12!25;UBERON:0000203!1.98e-12!25;UBERON:0003075!2.33e-12!86;UBERON:0007284!2.33e-12!86;UBERON:0002020!2.63e-12!34;UBERON:0003528!2.63e-12!34;UBERON:0001893!3.28e-12!34;UBERON:0000955!5.88e-12!69;UBERON:0006238!5.88e-12!69;UBERON:0001869!7.10e-12!32;UBERON:0002346!2.00e-11!90;UBERON:0002791!4.10e-11!33;UBERON:0005743!5.63e-11!86;UBERON:0001017!6.95e-11!82;UBERON:0000073!6.29e-10!94;UBERON:0001016!6.29e-10!94;UBERON:0000033!1.01e-09!123;UBERON:0000153!1.43e-09!129;UBERON:0007811!1.43e-09!129;UBERON:0007023!1.20e-08!115;UBERON:0000200!2.45e-08!6;UBERON:0002771!9.54e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;5.69e-21;2!UBERON:0010225;5.69e-21;2!UBERON:0002113;1.07e-15;24!UBERON:0011143;1.07e-15;24!UBERON:0006853;1.83e-14;3!UBERON:0007685;1.83e-14;3!UBERON:0004134;1.83e-14;3!UBERON:0000489;3.85e-13;29!UBERON:0006554;9.88e-13;30!UBERON:0001008;9.88e-13;30!UBERON:0002784;3.42e-11;4!UBERON:0001894;6.04e-07;7!UBERON:0005172;8.22e-07;52!UBERON:0005173;8.22e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0001897;5.69e-21;2!UBERON:0010225;5.69e-21;2!UBERON:0002113;1.07e-15;24!UBERON:0011143;1.07e-15;24!UBERON:0006853;1.83e-14;3!UBERON:0007685;1.83e-14;3!UBERON:0004134;1.83e-14;3!UBERON:0000489;3.85e-13;29!UBERON:0006554;9.88e-13;30!UBERON:0001008;9.88e-13;30!UBERON:0002784;3.42e-11;4!UBERON:0001894;6.04e-07;7!UBERON:0005172;8.22e-07;52!UBERON:0005173;8.22e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,6.96e-21,2;UBERON:0010225,6.96e-21,2;UBERON:0002113,1.41e-14,26;UBERON:0003918,1.41e-14,26;UBERON:0011143,1.41e-14,26;UBERON:0005095,1.41e-14,26;UBERON:0007687,1.41e-14,26;UBERON:0006853,1.60e-14,3;UBERON:0007685,1.60e-14,3;UBERON:0004134,1.60e-14,3;UBERON:0000489,2.30e-12,31;UBERON:0002784,3.79e-11,4;UBERON:0006554,2.00e-08,47;UBERON:0001008,2.89e-08,48;UBERON:0005172,1.99e-07,54;UBERON:0005173,1.99e-07,54;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7;UBERON:0002417,9.34e-07,60;UBERON:0000916,9.34e-07,60 | |||
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| ||
|short_description=p7@CIT | |short_description=p7@CIT | ||
}} | }} |
Latest revision as of 18:57, 16 September 2015
Short description: | p7@CIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CIT_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -30bp_to_ENST00000546026_5end |
EntrezGene: | CIT |
HGNC: | 1985 |
UniProt: | F5H4K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.60e-14 | 3 |
kidney cortex tubule cell | 1.60e-14 | 3 |
epithelial cell of proximal tubule | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 6.96e-21 | 2 |
thalamic complex | 6.96e-21 | 2 |
kidney | 1.41e-14 | 26 |
kidney mesenchyme | 1.41e-14 | 26 |
upper urinary tract | 1.41e-14 | 26 |
kidney rudiment | 1.41e-14 | 26 |
kidney field | 1.41e-14 | 26 |
renal cortex tubule | 1.60e-14 | 3 |
region of nephron tubule | 1.60e-14 | 3 |
proximal tubule | 1.60e-14 | 3 |
cavitated compound organ | 2.30e-12 | 31 |
regional part of diencephalon | 3.79e-11 | 4 |
urinary system structure | 2.00e-08 | 47 |
renal system | 2.89e-08 | 48 |
abdomen element | 1.99e-07 | 54 |
abdominal segment element | 1.99e-07 | 54 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
abdominal segment of trunk | 9.34e-07 | 60 |
abdomen | 9.34e-07 | 60 |