FFCP PHASE1:Hg19::chr19:40854890..40854898,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126526 | |EntrezGene=126526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26723 | |HGNC=26723 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-468bp_to_uc002oni.3_5end | |association_with_transcript=-468bp_to_uc002oni.3_5end | ||
|cluster_id=chr19:40854890..40854898,- | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_6_at_C19orf47_5end | |description=CAGE_peak_6_at_C19orf47_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002549!9.18e-26!2 | |ontology_enrichment_celltype=CL:0002549!9.18e-26!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.33e-09;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.33e-09;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.37e-10;11!UBERON:0009497;5.70e-09;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.37e-10;11!UBERON:0009497;5.70e-09;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!4.32e-26!2;UBERON:0002757!4.32e-26!2;UBERON:0010134!4.32e-26!2;UBERON:0002784!4.32e-26!2;UBERON:0005408!4.32e-26!2;UBERON:0001899!4.32e-26!2;UBERON:0003947!9.18e-26!2;UBERON:0005629!9.18e-26!2;UBERON:0005358!9.18e-26!2;UBERON:0001886!9.18e-26!2;UBERON:0004086!9.18e-26!2;UBERON:0005282!9.18e-26!2;UBERON:0005281!9.18e-26!2;UBERON:0002300!1.12e-17!3;UBERON:0003296!8.82e-14!4;UBERON:0010133!8.82e-14!4;UBERON:0005284!3.60e-11!5;UBERON:0001894!1.89e-08!7;UBERON:0006222!1.89e-08!7;UBERON:0002368!9.98e-07!35 | |ontology_enrichment_uberon=UBERON:0001905!4.32e-26!2;UBERON:0002757!4.32e-26!2;UBERON:0010134!4.32e-26!2;UBERON:0002784!4.32e-26!2;UBERON:0005408!4.32e-26!2;UBERON:0001899!4.32e-26!2;UBERON:0003947!9.18e-26!2;UBERON:0005629!9.18e-26!2;UBERON:0005358!9.18e-26!2;UBERON:0001886!9.18e-26!2;UBERON:0004086!9.18e-26!2;UBERON:0005282!9.18e-26!2;UBERON:0005281!9.18e-26!2;UBERON:0002300!1.12e-17!3;UBERON:0003296!8.82e-14!4;UBERON:0010133!8.82e-14!4;UBERON:0005284!3.60e-11!5;UBERON:0001894!1.89e-08!7;UBERON:0006222!1.89e-08!7;UBERON:0002368!9.98e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.74e-50;2!UBERON:0002757;2.74e-50;2!UBERON:0010134;2.74e-50;2!UBERON:0005408;2.74e-50;2!UBERON:0001899;2.74e-50;2!UBERON:0003296;5.56e-26;4!UBERON:0010133;5.56e-26;4!UBERON:0002784;5.56e-26;4!UBERON:0001894;1.65e-15;7!UBERON:0002368;1.77e-12;33!UBERON:0000949;3.68e-09;43 | |ontology_enrichment_uberon_v019=UBERON:0001905;2.74e-50;2!UBERON:0002757;2.74e-50;2!UBERON:0010134;2.74e-50;2!UBERON:0005408;2.74e-50;2!UBERON:0001899;2.74e-50;2!UBERON:0003296;5.56e-26;4!UBERON:0010133;5.56e-26;4!UBERON:0002784;5.56e-26;4!UBERON:0001894;1.65e-15;7!UBERON:0002368;1.77e-12;33!UBERON:0000949;3.68e-09;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.74e-50,2;UBERON:0002757,2.74e-50,2;UBERON:0010134,2.74e-50,2;UBERON:0005408,2.74e-50,2;UBERON:0001899,2.74e-50,2;UBERON:0003296,5.56e-26,4;UBERON:0010133,5.56e-26,4;UBERON:0002784,5.56e-26,4;UBERON:0001894,1.65e-15,7;UBERON:0006222,1.65e-15,7;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0002530,5.66e-08,59 | |||
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|short_description=p6@C19orf47 | |short_description=p6@C19orf47 | ||
}} | }} |
Latest revision as of 01:47, 18 September 2015
Short description: | p6@C19orf47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C19orf47_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -468bp_to_uc002oni.3_5end |
EntrezGene: | C19orf47 |
HGNC: | 26723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.74e-50 | 2 |
regional part of epithalamus | 2.74e-50 | 2 |
secretory circumventricular organ | 2.74e-50 | 2 |
circumventricular organ | 2.74e-50 | 2 |
epithalamus | 2.74e-50 | 2 |
gland of diencephalon | 5.56e-26 | 4 |
neuroendocrine gland | 5.56e-26 | 4 |
regional part of diencephalon | 5.56e-26 | 4 |
diencephalon | 1.65e-15 | 7 |
future diencephalon | 1.65e-15 | 7 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
gland | 5.66e-08 | 59 |