FFCP PHASE1:Hg19::chr11:2159738..2159755,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=448bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=448bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2159738..2159755,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_43_at_IGF2_5end | |description=CAGE_peak_43_at_IGF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.15e-18;19!CL:0000669;3.15e-09;4!CL:0002541;3.60e-08;3!CL:0002537;4.13e-08;5!CL:0002577;1.02e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;1.15e-18;19!CL:0000669;3.15e-09;4!CL:0002541;3.60e-08;3!CL:0002537;4.13e-08;5!CL:0002577;1.02e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.50e-18,19;CL:0000669,6.41e-09,4;CL:0002541,4.02e-08,3;CL:0002537,4.54e-08,5;CL:0002577,1.12e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.04e-14!14;UBERON:0000158!1.04e-14!14;UBERON:0007023!1.14e-12!115;UBERON:0000478!5.00e-09!24;UBERON:0000481!1.30e-08!347;UBERON:0003124!2.17e-08!7;UBERON:0000305!6.03e-08!7;UBERON:0001046!8.99e-08!19;UBERON:0000062!1.24e-07!511;UBERON:0000468!1.45e-07!659;UBERON:0002616!4.11e-07!59;UBERON:0004119!4.21e-07!169;UBERON:0000925!4.21e-07!169;UBERON:0006595!4.21e-07!169;UBERON:0000064!4.57e-07!219;UBERON:0001008!4.75e-07!45;UBERON:0004121!7.77e-07!169 | |ontology_enrichment_uberon=UBERON:0005631!1.04e-14!14;UBERON:0000158!1.04e-14!14;UBERON:0007023!1.14e-12!115;UBERON:0000478!5.00e-09!24;UBERON:0000481!1.30e-08!347;UBERON:0003124!2.17e-08!7;UBERON:0000305!6.03e-08!7;UBERON:0001046!8.99e-08!19;UBERON:0000062!1.24e-07!511;UBERON:0000468!1.45e-07!659;UBERON:0002616!4.11e-07!59;UBERON:0004119!4.21e-07!169;UBERON:0000925!4.21e-07!169;UBERON:0006595!4.21e-07!169;UBERON:0000064!4.57e-07!219;UBERON:0001008!4.75e-07!45;UBERON:0004121!7.77e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.60e-19;24!UBERON:0005631;1.68e-18;10!UBERON:0000158;1.68e-18;10!UBERON:0000305;3.86e-12;7!UBERON:0001987;1.13e-09;4!UBERON:0000922;8.07e-09;49!UBERON:0003124;3.60e-08;3!UBERON:0000920;3.60e-08;3!UBERON:0000077;3.64e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0000478;4.60e-19;24!UBERON:0005631;1.68e-18;10!UBERON:0000158;1.68e-18;10!UBERON:0000305;3.86e-12;7!UBERON:0001987;1.13e-09;4!UBERON:0000922;8.07e-09;49!UBERON:0003124;3.60e-08;3!UBERON:0000920;3.60e-08;3!UBERON:0000077;3.64e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.41e-26,14;UBERON:0000158,2.41e-26,14;UBERON:0000478,5.67e-19,24;UBERON:0003124,4.30e-16,7;UBERON:0000305,4.53e-12,7;UBERON:0004871,1.93e-10,8;UBERON:0001987,1.16e-09,4;UBERON:0004340,1.16e-09,4;UBERON:0004923,2.00e-08,66;UBERON:0004119,2.76e-08,160;UBERON:0000925,2.76e-08,160;UBERON:0006595,2.76e-08,160;UBERON:0000920,4.02e-08,3;UBERON:0001008,4.07e-07,48 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0,0,0,0,0,0,0,0,0,4.36882744260345,8.17677632508206,0.247532705920093,0.331397375727916,0,0,0,0,0.246242116153576,1.83600622119828,2.5076377718247,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,2.27036141467397,2.30470369792,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,4.75201142912821,2.71993622206413,0,0,0.505008341862199,0.500474079487857,0,0.877955241761676,0.30648779579902,0.901428353439581,0,0,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.69716365721711,0.207322110030741,0,0,0,0,0,4.64367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,7.13332943550059,0,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,2.1798003441664,0.1466765716419,0,0,0,0.531876233169741,2.08014873822732,0.514414748524284,0,0.266422179016099,1.28680194292333,9.76718889704597,0,0,2.48774364119782,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,1.89885516589815,0.831883446123229,0.713715955188647,1.10391690523754,0.702848489956279,0.902838299183157,0,1.03473071292505,0,0,0,14.2934844947801,14.0688803762451,0,0,0,2.12189300012382,6.65741758041988,8.46692821323105,0,0.153461973288062,0.561320188866147,0,0,0.160853921143607,0,0,0,0,1.03850885836724,0,10.7564910136544,0.40101294060657,0.0920809889358963,0.803701137152247,0.546273504020151,1.18011973463482,0.451199612907412,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0,0.647747748306418,0,1.08378575017541,1.00337954770971,0,0,0,0.219259876645935,0,0,0.328014645699706,0,1.854738209659,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0,2.04773681987496,0.330569830721956,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0.632758849437452,1.14378116354295,0,0.855877976067841,0,0,0.899362287916574,0.274537029736055,0.117812402345686,0,0,0,1.46290121726877,0,0,1.63799893689583,0,0,0,0,0,0,0,0,0,0,0,0.687743287091848,0,0,0,0,0,0,0,0,0,1.69458841398202,2.58303223602738,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,17.6670918705891,11.5816225524729,14.7437137007631,0,0.140669416410513,0,0,0.422250816255987,0.398495976502139,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0.789147245095469,0,0,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0.552896299656123,0.295547618953547,1.53569778007781,0,0,1.38510465306835,0,0.922255617552241,0,0,17.5450637852556,3.20591576906518,71.4266599864971,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.0884575645033392,3.66618086960175,0,0,0,0.269604531922708,4.81546588379273,0,0,0,0,0.394584402849391,1.20990716048664,1.22429104652196,5.18129952953601,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0,0,0,0,0.193978032976839,0.0882561266915003,2.25980740780532,0,0,0.316553979779393,0,0,0.640358984218058,1.79828648623917,0,0,16.4731197947486,0,0,0,0,0,0.203996435272644,0,0,0.410716136675979,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.599037001496973,0,0,1.00775208730089,0,0,4.72699093843342,4.86253564448882,6.60554729771012,5.11822903876694,0,0,0,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.83927341015997,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.453248366080503,0,10.6005511129777,0.129282956361551,0,0,0,0.106787412567695,1.41483874589699,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0,0,0.573409195690071,0.110929051536852,0.558867626472451,0,0,0,0,0.941063278792687,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.60011105865261,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,1.86623178009892,0,0,0,0.218419276384028,0,0,0.247871528518004,0,0,0,0,0,1.531227386766,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.484426936895553,1.42769420259154,0,0,0,0,0,0,2.18807844327902,1.50420656698514,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,2.42786241694653,0.227662191351298,3.81420191699347,0,0,0.203909198930495,0.0657727735628491,0,0,1.49136876415977,0.157115589916002,3.64353812307926,3.65263488203798,0,0,2.85906176706625,0.158013611732727,0,11.996220788878,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0.2291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| ||
|short_description=p43@IGF2 | |short_description=p43@IGF2 | ||
}} | }} |
Latest revision as of 08:19, 17 September 2015
Short description: | p43@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 448bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.50e-18 | 19 |
pericyte cell | 6.41e-09 | 4 |
chorionic membrane mesenchymal stem cell | 4.02e-08 | 3 |
amnion mesenchymal stem cell | 4.54e-08 | 5 |
placental epithelial cell | 1.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.41e-26 | 14 |
membranous layer | 2.41e-26 | 14 |
extraembryonic structure | 5.67e-19 | 24 |
chorion | 4.30e-16 | 7 |
amnion | 4.53e-12 | 7 |
somatic layer of lateral plate mesoderm | 1.93e-10 | 8 |
placenta | 1.16e-09 | 4 |
allantois | 1.16e-09 | 4 |
organ component layer | 2.00e-08 | 66 |
endoderm-derived structure | 2.76e-08 | 160 |
endoderm | 2.76e-08 | 160 |
presumptive endoderm | 2.76e-08 | 160 |
egg chorion | 4.02e-08 | 3 |
renal system | 4.07e-07 | 48 |