FFCP PHASE1:Hg19::chr16:66945221..66945237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:66945221..66945237,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr16:66945221..66945237,- | |description=CAGE_peak_at_chr16:66945221..66945237,- | ||
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|ontology_enrichment_celltype=CL:0002076!1.01e-17!43;CL:0000066!7.47e-17!254;CL:0002368!1.07e-12!13;CL:0002623!3.89e-12!3;CL:0000223!7.33e-12!59;CL:0002541!9.66e-12!3;CL:0002251!7.39e-10!21;CL:0000575!1.86e-08!2;CL:0000039!5.24e-08!7;CL:0000586!5.24e-08!7;CL:0000159!7.01e-08!2;CL:1000415!1.72e-07!2;CL:0000622!1.99e-07!5;CL:0000312!2.99e-07!5;CL:0002202!6.43e-07!9;CL:0002632!6.43e-07!9;CL:0002159!6.45e-07!13 | |ontology_enrichment_celltype=CL:0002076!1.01e-17!43;CL:0000066!7.47e-17!254;CL:0002368!1.07e-12!13;CL:0002623!3.89e-12!3;CL:0000223!7.33e-12!59;CL:0002541!9.66e-12!3;CL:0002251!7.39e-10!21;CL:0000575!1.86e-08!2;CL:0000039!5.24e-08!7;CL:0000586!5.24e-08!7;CL:0000159!7.01e-08!2;CL:1000415!1.72e-07!2;CL:0000622!1.99e-07!5;CL:0000312!2.99e-07!5;CL:0002202!6.43e-07!9;CL:0002632!6.43e-07!9;CL:0002159!6.45e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.62e-19;3!CL:0002623;9.93e-19;3!CL:0002328;1.09e-18;3!CL:0002252;7.13e-15;1!CL:0002202;8.03e-14;9!CL:0002632;8.03e-14;9!CL:0002076;2.50e-12;42!CL:0000622;1.24e-11;5!CL:0000154;7.59e-10;6!CL:0002368;9.47e-10;13!CL:0000575;5.19e-08;2!CL:0000349;6.43e-07;19!CL:0000150;7.53e-07;9 | |ontology_enrichment_celltype_v019=CL:0002541;4.62e-19;3!CL:0002623;9.93e-19;3!CL:0002328;1.09e-18;3!CL:0002252;7.13e-15;1!CL:0002202;8.03e-14;9!CL:0002632;8.03e-14;9!CL:0002076;2.50e-12;42!CL:0000622;1.24e-11;5!CL:0000154;7.59e-10;6!CL:0002368;9.47e-10;13!CL:0000575;5.19e-08;2!CL:0000349;6.43e-07;19!CL:0000150;7.53e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.62e-19,3;CL:0002328,8.69e-19,3;CL:0002623,9.50e-19,3;CL:0002076,6.55e-15,42;CL:0002252,7.13e-15,1;CL:0002202,7.69e-14,9;CL:0002632,7.69e-14,9;CL:0000622,1.21e-11,5;CL:0000223,1.19e-10,58;CL:0000154,7.42e-10,6;CL:0002368,9.19e-10,13;CL:0000575,5.02e-08,2;CL:0000349,6.50e-07,19;CL:0000150,7.42e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.94e-08;2!UBERON:0010056;5.94e-08;2 | |ontology_enrichment_development_v019=UBERON:0008814;5.94e-08;2!UBERON:0010056;5.94e-08;2 | ||
|ontology_enrichment_disease=DOID:305!6.06e-09!106;DOID:0050687!8.97e-08!143 | |ontology_enrichment_disease=DOID:305!6.06e-09!106;DOID:0050687!8.97e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.97e-18!72;UBERON:0001737!5.61e-18!9;UBERON:0001557!3.42e-16!19;UBERON:0000065!6.37e-15!53;UBERON:0000072!7.87e-12!46;UBERON:0000476!9.66e-12!3;UBERON:0000920!9.66e-12!3;UBERON:0004119!2.72e-11!169;UBERON:0000925!2.72e-11!169;UBERON:0006595!2.72e-11!169;UBERON:0000077!9.37e-10!130;UBERON:0001041!1.13e-09!98;UBERON:0008947!4.24e-09!38;UBERON:0003258!4.24e-09!38;UBERON:0003124!1.64e-08!7;UBERON:0001007!4.51e-08!155;UBERON:0001555!4.51e-08!155;UBERON:0007026!4.51e-08!155;UBERON:0000166!1.19e-07!21;UBERON:0004921!4.95e-07!129;UBERON:0004185!4.95e-07!129 | |ontology_enrichment_uberon=UBERON:0001004!2.97e-18!72;UBERON:0001737!5.61e-18!9;UBERON:0001557!3.42e-16!19;UBERON:0000065!6.37e-15!53;UBERON:0000072!7.87e-12!46;UBERON:0000476!9.66e-12!3;UBERON:0000920!9.66e-12!3;UBERON:0004119!2.72e-11!169;UBERON:0000925!2.72e-11!169;UBERON:0006595!2.72e-11!169;UBERON:0000077!9.37e-10!130;UBERON:0001041!1.13e-09!98;UBERON:0008947!4.24e-09!38;UBERON:0003258!4.24e-09!38;UBERON:0003124!1.64e-08!7;UBERON:0001007!4.51e-08!155;UBERON:0001555!4.51e-08!155;UBERON:0007026!4.51e-08!155;UBERON:0000166!1.19e-07!21;UBERON:0004921!4.95e-07!129;UBERON:0004185!4.95e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.62e-19;3!UBERON:0000920;4.62e-19;3!UBERON:0004815;1.09e-18;3!UBERON:0002031;1.09e-18;3!UBERON:0005631;1.15e-12;10!UBERON:0000158;1.15e-12;10!UBERON:0002185;1.31e-11;5!UBERON:0001044;7.59e-10;6!UBERON:0003293;7.59e-10;6!UBERON:0003294;7.59e-10;6!UBERON:0010047;7.59e-10;6!UBERON:0003408;7.59e-10;6!UBERON:0000167;7.59e-10;6!UBERON:0001041;3.30e-09;14!UBERON:0000485;1.50e-08;7!UBERON:0007196;1.60e-08;15!UBERON:0001558;1.60e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0003124;4.62e-19;3!UBERON:0000920;4.62e-19;3!UBERON:0004815;1.09e-18;3!UBERON:0002031;1.09e-18;3!UBERON:0005631;1.15e-12;10!UBERON:0000158;1.15e-12;10!UBERON:0002185;1.31e-11;5!UBERON:0001044;7.59e-10;6!UBERON:0003293;7.59e-10;6!UBERON:0003294;7.59e-10;6!UBERON:0010047;7.59e-10;6!UBERON:0003408;7.59e-10;6!UBERON:0000167;7.59e-10;6!UBERON:0001041;3.30e-09;14!UBERON:0000485;1.50e-08;7!UBERON:0007196;1.60e-08;15!UBERON:0001558;1.60e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.62e-19,3;UBERON:0004815,8.69e-19,3;UBERON:0002031,8.69e-19,3;UBERON:0002185,1.15e-11,5;UBERON:0001044,7.42e-10,6;UBERON:0003293,7.42e-10,6;UBERON:0003294,7.42e-10,6;UBERON:0010047,7.42e-10,6;UBERON:0000167,7.42e-10,6;UBERON:0005631,3.35e-09,14;UBERON:0000158,3.35e-09,14;UBERON:0003124,1.05e-08,7;UBERON:0007196,1.56e-08,15;UBERON:0001558,1.56e-08,15;UBERON:0001041,6.16e-07,87;UBERON:0000485,7.21e-07,9 | |||
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| ||
|short_description=p@chr16:66945221..66945237,- | |short_description=p@chr16:66945221..66945237,- | ||
}} | }} |
Latest revision as of 11:07, 25 July 2015
Short description: | p@chr16:66945221..66945237, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:66945221..66945237, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.62e-19 | 3 |
bronchial epithelial cell | 8.69e-19 | 3 |
acinar cell of salivary gland | 9.50e-19 | 3 |
endo-epithelial cell | 6.55e-15 | 42 |
epithelial cell of esophagus | 7.13e-15 | 1 |
epithelial cell of tracheobronchial tree | 7.69e-14 | 9 |
epithelial cell of lower respiratory tract | 7.69e-14 | 9 |
acinar cell | 1.21e-11 | 5 |
endodermal cell | 1.19e-10 | 58 |
protein secreting cell | 7.42e-10 | 6 |
respiratory epithelial cell | 9.19e-10 | 13 |
corneal epithelial cell | 5.02e-08 | 2 |
extraembryonic cell | 6.50e-07 | 19 |
glandular epithelial cell | 7.42e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.62e-19 | 3 |
lower respiratory tract epithelium | 8.69e-19 | 3 |
epithelium of bronchus | 8.69e-19 | 3 |
bronchus | 1.15e-11 | 5 |
saliva-secreting gland | 7.42e-10 | 6 |
gland of oral region | 7.42e-10 | 6 |
gland of foregut | 7.42e-10 | 6 |
oral gland | 7.42e-10 | 6 |
oral cavity | 7.42e-10 | 6 |
extraembryonic membrane | 3.35e-09 | 14 |
membranous layer | 3.35e-09 | 14 |
chorion | 1.05e-08 | 7 |
tracheobronchial tree | 1.56e-08 | 15 |
lower respiratory tract | 1.56e-08 | 15 |
foregut | 6.16e-07 | 87 |
simple columnar epithelium | 7.21e-07 | 9 |