FFCP PHASE1:Hg19::chr20:19866879..19866890,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:19866879..19866890,+
|short_description=p24@RIN2
|description=CAGE_peak_24_at_RIN2_5end
|association_with_transcript=-274bp_to_ENST00000255006,NM_00124258...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |UniProt=Q8WYP3 | ||
|association_with_transcript=-274bp_to_ENST00000255006,NM_001242581_5end | |||
|cluster_id=chr20:19866879..19866890,+ | |||
|description=CAGE_peak_24_at_RIN2_5end | |||
|id=chr20:19866879..19866890,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.75e-10!24;CL:0000071!8.15e-10!18;CL:0002546!8.15e-10!18 | |||
|ontology_enrichment_celltype_v019=CL:0002379;2.71e-19;1!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,3.25e-19,1;CL:0000346,2.47e-07,3;CL:1000428,2.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.71e-19;1!DOID:3565;2.71e-19;1!DOID:4929;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.25e-19,1;DOID:3565,3.25e-19,1;DOID:4929,2.49e-10,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001871;2.98e-11;6!UBERON:0001876;2.48e-10;2!UBERON:0001897;2.48e-10;2!UBERON:0001875;2.48e-10;2!UBERON:0006514;2.48e-10;2!UBERON:0010225;2.48e-10;2!UBERON:0002420;5.86e-09;9!UBERON:0007245;5.86e-09;9!UBERON:0010009;5.86e-09;9!UBERON:0010011;5.86e-09;9!UBERON:0000454;5.86e-09;9!UBERON:0000412;2.63e-07;3!UBERON:0001992;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,3.85e-11,6;UBERON:0001875,1.72e-10,2;UBERON:0006514,1.72e-10,2;UBERON:0001897,2.07e-10,2;UBERON:0010225,2.07e-10,2;UBERON:0001876,3.27e-10,2;UBERON:0002420,5.64e-09,9;UBERON:0007245,5.64e-09,9;UBERON:0010009,5.64e-09,9;UBERON:0010011,5.64e-09,9;UBERON:0000454,5.64e-09,9;UBERON:0000412,2.47e-07,3;UBERON:0001992,2.47e-07,3;UBERON:0002780,3.48e-07,41;UBERON:0001890,3.48e-07,41;UBERON:0003080,3.48e-07,41;UBERON:0006240,3.48e-07,41 | |||
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| ||
|short_description=p24@RIN2 | |||
}} | }} |
Latest revision as of 16:01, 24 September 2015
Short description: | p24@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -274bp_to_ENST00000255006, NM_001242581_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 3.25e-19 | 1 |
hair follicle dermal papilla cell | 2.47e-07 | 3 |
stem cell of epidermis | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 3.85e-11 | 6 |
globus pallidus | 1.72e-10 | 2 |
pallidum | 1.72e-10 | 2 |
dorsal plus ventral thalamus | 2.07e-10 | 2 |
thalamic complex | 2.07e-10 | 2 |
amygdala | 3.27e-10 | 2 |
basal ganglion | 5.64e-09 | 9 |
nuclear complex of neuraxis | 5.64e-09 | 9 |
aggregate regional part of brain | 5.64e-09 | 9 |
collection of basal ganglia | 5.64e-09 | 9 |
cerebral subcortex | 5.64e-09 | 9 |
dermal papilla | 2.47e-07 | 3 |
papillary layer of dermis | 2.47e-07 | 3 |
regional part of forebrain | 3.48e-07 | 41 |
forebrain | 3.48e-07 | 41 |
anterior neural tube | 3.48e-07 | 41 |
future forebrain | 3.48e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.25e-19 | 1 |
meningioma | 3.25e-19 | 1 |
tubular adenocarcinoma | 2.49e-10 | 2 |