FFCP PHASE1:Hg19::chr11:71159458..71159469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1717 | |EntrezGene=1717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2860 | |HGNC=2860 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBM7 | |UniProt=Q9UBM7 | ||
|association_with_transcript=7bp_to_NM_001163817,NM_001360,uc001oqk.2,uc001oql.2_5end | |association_with_transcript=7bp_to_NM_001163817,NM_001360,uc001oqk.2,uc001oql.2_5end | ||
|cluster_id=chr11:71159458..71159469,- | |||
|description=CAGE_peak_2_at_DHCR7_5end | |description=CAGE_peak_2_at_DHCR7_5end | ||
|id=chr11:71159458..71159469,- | |id=chr11:71159458..71159469,- | ||
|ontology_enrichment_celltype=CL:0000066!3.92e-18!254;CL:0000220!7.71e-15!246;CL:0002321!2.13e-14!248;CL:0000548!5.33e-07!679;CL:0000004!5.33e-07!679;CL:0000255!5.33e-07!679;CL:0000222!6.15e-07!119 | |ontology_enrichment_celltype=CL:0000066!3.92e-18!254;CL:0000220!7.71e-15!246;CL:0002321!2.13e-14!248;CL:0000548!5.33e-07!679;CL:0000004!5.33e-07!679;CL:0000255!5.33e-07!679;CL:0000222!6.15e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:1000449;5.74e-09;15!CL:1000497;1.17e-08;17!CL:0002518;1.17e-08;17!CL:0002681;3.83e-08;12!CL:0002584;3.83e-08;12 | |ontology_enrichment_celltype_v019=CL:1000449;5.74e-09;15!CL:1000497;1.17e-08;17!CL:0002518;1.17e-08;17!CL:0002681;3.83e-08;12!CL:0002584;3.83e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.86e-10,253;CL:1000449,2.49e-08,15;CL:0002321,4.13e-08,250;CL:1000497,6.74e-08,17;CL:0002518,6.74e-08,17;CL:0002681,2.14e-07,12;CL:0002584,2.14e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.47e-22!312;UBERON:0000483!1.84e-22!309;UBERON:0000475!1.30e-15!365;UBERON:0000477!2.79e-15!286;UBERON:0000481!7.48e-14!347;UBERON:0002100!4.05e-13!216;UBERON:0004111!4.31e-12!241;UBERON:0000025!9.59e-12!194;UBERON:0009569!7.93e-11!113;UBERON:0000064!7.98e-11!219;UBERON:0003914!1.50e-10!118;UBERON:0005256!2.11e-10!143;UBERON:0003104!9.47e-09!238;UBERON:0009142!9.47e-09!238;UBERON:0000490!1.22e-08!138;UBERON:0005911!8.03e-08!82;UBERON:0000923!2.33e-07!604;UBERON:0005291!2.33e-07!604;UBERON:0006598!2.33e-07!604;UBERON:0002532!2.33e-07!604;UBERON:0002050!2.42e-07!605;UBERON:0005423!2.42e-07!605;UBERON:0005177!2.66e-07!107;UBERON:0002417!4.16e-07!61;UBERON:0000916!4.16e-07!61;UBERON:0005172!7.70e-07!55;UBERON:0005173!7.70e-07!55 | |ontology_enrichment_uberon=UBERON:0000119!1.47e-22!312;UBERON:0000483!1.84e-22!309;UBERON:0000475!1.30e-15!365;UBERON:0000477!2.79e-15!286;UBERON:0000481!7.48e-14!347;UBERON:0002100!4.05e-13!216;UBERON:0004111!4.31e-12!241;UBERON:0000025!9.59e-12!194;UBERON:0009569!7.93e-11!113;UBERON:0000064!7.98e-11!219;UBERON:0003914!1.50e-10!118;UBERON:0005256!2.11e-10!143;UBERON:0003104!9.47e-09!238;UBERON:0009142!9.47e-09!238;UBERON:0000490!1.22e-08!138;UBERON:0005911!8.03e-08!82;UBERON:0000923!2.33e-07!604;UBERON:0005291!2.33e-07!604;UBERON:0006598!2.33e-07!604;UBERON:0002532!2.33e-07!604;UBERON:0002050!2.42e-07!605;UBERON:0005423!2.42e-07!605;UBERON:0005177!2.66e-07!107;UBERON:0002417!4.16e-07!61;UBERON:0000916!4.16e-07!61;UBERON:0005172!7.70e-07!55;UBERON:0005173!7.70e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;4.19e-09;15!UBERON:0006555;5.74e-09;15!UBERON:0004819;5.74e-09;15!UBERON:0001285;5.74e-09;15!UBERON:0007684;5.74e-09;15!UBERON:0001851;8.78e-09;15!UBERON:0001225;3.83e-08;12!UBERON:0008987;3.83e-08;12!UBERON:0006554;7.40e-07;30!UBERON:0001008;7.40e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0000353;4.19e-09;15!UBERON:0006555;5.74e-09;15!UBERON:0004819;5.74e-09;15!UBERON:0001285;5.74e-09;15!UBERON:0007684;5.74e-09;15!UBERON:0001851;8.78e-09;15!UBERON:0001225;3.83e-08;12!UBERON:0008987;3.83e-08;12!UBERON:0006554;7.40e-07;30!UBERON:0001008;7.40e-07;30 | ||
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| ||
|short_description=p2@DHCR7 | |short_description=p2@DHCR7 | ||
}} | }} |
Latest revision as of 23:43, 19 September 2015
Short description: | p2@DHCR7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DHCR7_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_NM_001163817, NM_001360, uc001oqk.2, uc001oql.2_5end |
EntrezGene: | DHCR7 |
HGNC: | 2860 |
UniProt: | Q9UBM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.86e-10 | 253 |
epithelial cell of nephron | 2.49e-08 | 15 |
embryonic cell | 4.13e-08 | 250 |
kidney cell | 6.74e-08 | 17 |
kidney epithelial cell | 6.74e-08 | 17 |
kidney cortical cell | 2.14e-07 | 12 |
renal cortical epithelial cell | 2.14e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell layer | 7.49e-13 | 309 |
epithelium | 7.79e-13 | 306 |
trunk | 1.70e-10 | 199 |
epithelial tube | 8.41e-09 | 117 |
subdivision of trunk | 9.01e-09 | 112 |
urinary system structure | 2.07e-08 | 47 |
trunk mesenchyme | 2.32e-08 | 122 |
parenchyma | 2.46e-08 | 15 |
nephron epithelium | 2.49e-08 | 15 |
renal tubule | 2.49e-08 | 15 |
nephron tubule | 2.49e-08 | 15 |
nephron | 2.49e-08 | 15 |
uriniferous tubule | 2.49e-08 | 15 |
nephrogenic mesenchyme | 2.49e-08 | 15 |
cortex | 3.09e-08 | 15 |
mesenchyme | 3.55e-08 | 160 |
entire embryonic mesenchyme | 3.55e-08 | 160 |
renal system | 4.54e-08 | 48 |
excretory tube | 1.41e-07 | 16 |
kidney epithelium | 1.41e-07 | 16 |
abdominal segment of trunk | 2.12e-07 | 60 |
abdomen | 2.12e-07 | 60 |
cortex of kidney | 2.14e-07 | 12 |
renal parenchyma | 2.14e-07 | 12 |
developing anatomical structure | 3.37e-07 | 581 |
abdomen element | 6.33e-07 | 54 |
abdominal segment element | 6.33e-07 | 54 |
tube | 9.41e-07 | 192 |