FFCP PHASE1:Hg19::chr17:42988813..42988850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=A1L194 | |UniProt=A1L194 | ||
|association_with_transcript=-15bp_to_BC127871_5end | |association_with_transcript=-15bp_to_BC127871_5end | ||
|cluster_id=chr17:42988813..42988850,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_6_at_GFAP_5end | |description=CAGE_peak_6_at_GFAP_5end | ||
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|ontology_enrichment_celltype=CL:0000128!2.86e-09!7;CL:0000126!2.86e-09!7;CL:0000127!2.86e-09!7;CL:0002453!2.86e-09!7 | |ontology_enrichment_celltype=CL:0000128!2.86e-09!7;CL:0000126!2.86e-09!7;CL:0000127!2.86e-09!7;CL:0002453!2.86e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;4.91e-12;7!CL:0000126;4.91e-12;7!CL:0000127;4.91e-12;7!CL:0002605;7.51e-11;3!CL:0002319;6.18e-08;25!CL:0000047;5.89e-07;2 | |ontology_enrichment_celltype_v019=CL:0000128;4.91e-12;7!CL:0000126;4.91e-12;7!CL:0000127;4.91e-12;7!CL:0002605;7.51e-11;3!CL:0002319;6.18e-08;25!CL:0000047;5.89e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.70e-12,7;CL:0000126,4.70e-12,7;CL:0000127,4.70e-12,7;CL:0002453,4.70e-12,7;CL:0002605,7.77e-11,3;CL:0002319,6.48e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.63e-17;82!UBERON:0006241;3.03e-11;3!UBERON:0003057;3.03e-11;3!UBERON:0006215;1.31e-09;3!UBERON:0010122;5.89e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;2.63e-17;82!UBERON:0006241;3.03e-11;3!UBERON:0003057;3.03e-11;3!UBERON:0006215;1.31e-09;3!UBERON:0010122;5.89e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.11e-69!57;UBERON:0005068!4.11e-69!57;UBERON:0006241!4.11e-69!57;UBERON:0007135!4.11e-69!57;UBERON:0001017!1.70e-65!82;UBERON:0005743!1.49e-63!86;UBERON:0002616!5.73e-62!59;UBERON:0000073!5.07e-58!94;UBERON:0001016!5.07e-58!94;UBERON:0003075!2.61e-57!86;UBERON:0007284!2.61e-57!86;UBERON:0000955!1.39e-54!69;UBERON:0006238!1.39e-54!69;UBERON:0002346!6.81e-54!90;UBERON:0004121!7.41e-48!169;UBERON:0000033!1.32e-46!123;UBERON:0000924!3.46e-46!173;UBERON:0006601!3.46e-46!173;UBERON:0002780!5.97e-46!41;UBERON:0001890!5.97e-46!41;UBERON:0006240!5.97e-46!41;UBERON:0003080!1.40e-44!42;UBERON:0000153!1.86e-43!129;UBERON:0007811!1.86e-43!129;UBERON:0002020!2.08e-41!34;UBERON:0003528!2.08e-41!34;UBERON:0001893!2.71e-41!34;UBERON:0002791!8.81e-40!33;UBERON:0001869!5.89e-38!32;UBERON:0003056!7.05e-38!61;UBERON:0007023!6.90e-33!115;UBERON:0000956!1.21e-27!25;UBERON:0000203!1.21e-27!25;UBERON:0003076!1.83e-25!15;UBERON:0003057!1.83e-25!15;UBERON:0002619!5.54e-23!22;UBERON:0004732!4.37e-22!13;UBERON:0004733!2.11e-20!12;UBERON:0002028!2.11e-20!12;UBERON:0007277!2.11e-20!12;UBERON:0001950!5.51e-20!20;UBERON:0000025!9.94e-18!194;UBERON:0000477!3.93e-17!286;UBERON:0000475!3.76e-16!365;UBERON:0000064!7.82e-16!219;UBERON:0002308!2.06e-15!9;UBERON:0000125!2.06e-15!9;UBERON:0002680!2.48e-15!9;UBERON:0001895!2.48e-15!9;UBERON:0010092!2.48e-15!9;UBERON:0002420!5.40e-15!9;UBERON:0007245!5.40e-15!9;UBERON:0010009!5.40e-15!9;UBERON:0010011!5.40e-15!9;UBERON:0000454!5.40e-15!9;UBERON:0004111!1.44e-14!241;UBERON:0000483!4.76e-13!309;UBERON:0000119!1.01e-12!312;UBERON:0009663!4.27e-12!7;UBERON:0000481!8.00e-12!347;UBERON:0002298!2.05e-11!8;UBERON:0002037!1.96e-10!6;UBERON:0006215!1.96e-10!6;UBERON:0000200!3.76e-10!6;UBERON:0000062!4.11e-10!511;UBERON:0000349!3.89e-09!5;UBERON:0005174!5.98e-09!5;UBERON:0001137!5.98e-09!5;UBERON:0000922!7.45e-09!612;UBERON:0001872!1.39e-08!5;UBERON:0000923!2.25e-08!604;UBERON:0005291!2.25e-08!604;UBERON:0006598!2.25e-08!604;UBERON:0002532!2.25e-08!604;UBERON:0002050!2.59e-08!605;UBERON:0005423!2.59e-08!605;UBERON:0000467!5.97e-08!625;UBERON:0000480!6.84e-08!626;UBERON:0000468!7.62e-08!659;UBERON:0001871!2.04e-07!7;UBERON:0000369!2.88e-07!4;UBERON:0002435!2.88e-07!4;UBERON:0000204!2.88e-07!4;UBERON:0010082!2.88e-07!4;UBERON:0001896!9.86e-07!3;UBERON:0005290!9.86e-07!3;UBERON:0010096!9.86e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!4.11e-69!57;UBERON:0005068!4.11e-69!57;UBERON:0006241!4.11e-69!57;UBERON:0007135!4.11e-69!57;UBERON:0001017!1.70e-65!82;UBERON:0005743!1.49e-63!86;UBERON:0002616!5.73e-62!59;UBERON:0000073!5.07e-58!94;UBERON:0001016!5.07e-58!94;UBERON:0003075!2.61e-57!86;UBERON:0007284!2.61e-57!86;UBERON:0000955!1.39e-54!69;UBERON:0006238!1.39e-54!69;UBERON:0002346!6.81e-54!90;UBERON:0004121!7.41e-48!169;UBERON:0000033!1.32e-46!123;UBERON:0000924!3.46e-46!173;UBERON:0006601!3.46e-46!173;UBERON:0002780!5.97e-46!41;UBERON:0001890!5.97e-46!41;UBERON:0006240!5.97e-46!41;UBERON:0003080!1.40e-44!42;UBERON:0000153!1.86e-43!129;UBERON:0007811!1.86e-43!129;UBERON:0002020!2.08e-41!34;UBERON:0003528!2.08e-41!34;UBERON:0001893!2.71e-41!34;UBERON:0002791!8.81e-40!33;UBERON:0001869!5.89e-38!32;UBERON:0003056!7.05e-38!61;UBERON:0007023!6.90e-33!115;UBERON:0000956!1.21e-27!25;UBERON:0000203!1.21e-27!25;UBERON:0003076!1.83e-25!15;UBERON:0003057!1.83e-25!15;UBERON:0002619!5.54e-23!22;UBERON:0004732!4.37e-22!13;UBERON:0004733!2.11e-20!12;UBERON:0002028!2.11e-20!12;UBERON:0007277!2.11e-20!12;UBERON:0001950!5.51e-20!20;UBERON:0000025!9.94e-18!194;UBERON:0000477!3.93e-17!286;UBERON:0000475!3.76e-16!365;UBERON:0000064!7.82e-16!219;UBERON:0002308!2.06e-15!9;UBERON:0000125!2.06e-15!9;UBERON:0002680!2.48e-15!9;UBERON:0001895!2.48e-15!9;UBERON:0010092!2.48e-15!9;UBERON:0002420!5.40e-15!9;UBERON:0007245!5.40e-15!9;UBERON:0010009!5.40e-15!9;UBERON:0010011!5.40e-15!9;UBERON:0000454!5.40e-15!9;UBERON:0004111!1.44e-14!241;UBERON:0000483!4.76e-13!309;UBERON:0000119!1.01e-12!312;UBERON:0009663!4.27e-12!7;UBERON:0000481!8.00e-12!347;UBERON:0002298!2.05e-11!8;UBERON:0002037!1.96e-10!6;UBERON:0006215!1.96e-10!6;UBERON:0000200!3.76e-10!6;UBERON:0000062!4.11e-10!511;UBERON:0000349!3.89e-09!5;UBERON:0005174!5.98e-09!5;UBERON:0001137!5.98e-09!5;UBERON:0000922!7.45e-09!612;UBERON:0001872!1.39e-08!5;UBERON:0000923!2.25e-08!604;UBERON:0005291!2.25e-08!604;UBERON:0006598!2.25e-08!604;UBERON:0002532!2.25e-08!604;UBERON:0002050!2.59e-08!605;UBERON:0005423!2.59e-08!605;UBERON:0000467!5.97e-08!625;UBERON:0000480!6.84e-08!626;UBERON:0000468!7.62e-08!659;UBERON:0001871!2.04e-07!7;UBERON:0000369!2.88e-07!4;UBERON:0002435!2.88e-07!4;UBERON:0000204!2.88e-07!4;UBERON:0010082!2.88e-07!4;UBERON:0001896!9.86e-07!3;UBERON:0005290!9.86e-07!3;UBERON:0010096!9.86e-07!3 | ||
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|short_description=p6@GFAP | |short_description=p6@GFAP | ||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p6@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -15bp_to_BC127871_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A1L194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.70e-12 | 7 |
macroglial cell | 4.70e-12 | 7 |
astrocyte | 4.70e-12 | 7 |
oligodendrocyte precursor cell | 4.70e-12 | 7 |
astrocyte of the cerebral cortex | 7.77e-11 | 3 |
neural cell | 6.48e-08 | 25 |