FFCP PHASE1:Hg19::chr20:11850605..11850610,+: Difference between revisions
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|id=chr20:11850605..11850610,+
|short_description=p@chr20:11850605..11850610,+
|description=CAGE_peak_at_chr20:11850605..11850610,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:11850605..11850610,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr20:11850605..11850610,+ | |||
|id=chr20:11850605..11850610,+ | |||
|ontology_enrichment_celltype=CL:0002541!6.64e-41!3;CL:0002537!1.65e-24!5;CL:0000349!8.69e-19!3;CL:0002577!8.69e-19!3;CL:0002536!5.37e-08!2;CL:0002535!8.60e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.28e-53;3!CL:0000349;8.35e-34;19!CL:0002577;2.09e-14;3!CL:0002537;3.22e-09;5!CL:0000134;4.52e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.28e-53,3;CL:0000349,8.35e-34,19;CL:0002577,2.09e-14,3;CL:0002537,3.22e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.48e-40;1!UBERON:0004872;5.70e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.50e-94!14;UBERON:0000158!9.50e-94!14;UBERON:0003124!2.00e-68!7;UBERON:0000478!2.33e-54!24;UBERON:0000476!6.64e-41!3;UBERON:0000920!6.64e-41!3;UBERON:0001987!9.47e-31!4;UBERON:0004340!9.47e-31!4;UBERON:0000305!1.32e-30!7;UBERON:0004871!7.78e-27!8;UBERON:0004923!2.43e-22!57;UBERON:0000995!2.01e-10!21;UBERON:0005795!5.84e-10!22;UBERON:0003975!5.84e-10!22;UBERON:0004175!8.60e-09!25;UBERON:0006955!8.60e-08!2;UBERON:0004801!8.60e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.28e-53;3!UBERON:0000920;1.28e-53;3!UBERON:0000478;1.51e-41;24!UBERON:0001987;4.05e-40;4!UBERON:0005631;2.70e-36;10!UBERON:0000158;2.70e-36;10!UBERON:0000305;6.04e-07;7!UBERON:0000077;7.45e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,4.43e-90,7;UBERON:0005631,1.65e-70,14;UBERON:0000158,1.65e-70,14;UBERON:0000920,1.28e-53,3;UBERON:0000478,1.51e-41,24;UBERON:0001987,4.05e-40,4;UBERON:0004340,4.05e-40,4;UBERON:0004923,1.27e-15,66;UBERON:0000995,1.53e-08,21;UBERON:0005795,3.39e-08,22;UBERON:0003975,3.39e-08,22;UBERON:0004175,2.50e-07,25;UBERON:0000305,6.04e-07,7 | |||
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|short_description=p@chr20:11850605..11850610,+ | |||
}} | }} |
Latest revision as of 11:55, 28 July 2015
Short description: | p@chr20:11850605..11850610, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:11850605..11850610, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.28e-53 | 3 |
extraembryonic cell | 8.35e-34 | 19 |
placental epithelial cell | 2.09e-14 | 3 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
chorion | 4.43e-90 | 7 |
extraembryonic membrane | 1.65e-70 | 14 |
membranous layer | 1.65e-70 | 14 |
egg chorion | 1.28e-53 | 3 |
extraembryonic structure | 1.51e-41 | 24 |
placenta | 4.05e-40 | 4 |
allantois | 4.05e-40 | 4 |
organ component layer | 1.27e-15 | 66 |
uterus | 1.53e-08 | 21 |
embryonic uterus | 3.39e-08 | 22 |
internal female genitalia | 3.39e-08 | 22 |
internal genitalia | 2.50e-07 | 25 |
amnion | 6.04e-07 | 7 |