FFCP PHASE1:Hg19::chr1:70033759..70033766,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57554 | |EntrezGene=57554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18531 | |HGNC=18531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-314bp_to_ENST00000310961_5end | |association_with_transcript=-314bp_to_ENST00000310961_5end | ||
|cluster_id=chr1:70033759..70033766,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_18_at_LRRC7_5end | |description=CAGE_peak_18_at_LRRC7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.34e-08;2 | |ontology_enrichment_development_v019=UBERON:0010122;1.34e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.29e-72!34;UBERON:0002020!5.32e-72!34;UBERON:0003528!5.32e-72!34;UBERON:0002791!4.32e-69!33;UBERON:0001869!6.30e-67!32;UBERON:0002780!5.51e-63!41;UBERON:0001890!5.51e-63!41;UBERON:0006240!5.51e-63!41;UBERON:0003080!2.52e-61!42;UBERON:0001049!8.00e-60!57;UBERON:0005068!8.00e-60!57;UBERON:0006241!8.00e-60!57;UBERON:0007135!8.00e-60!57;UBERON:0001950!2.88e-59!20;UBERON:0002619!3.51e-59!22;UBERON:0001017!3.84e-55!82;UBERON:0005743!7.87e-55!86;UBERON:0002616!5.46e-54!59;UBERON:0000956!1.15e-51!25;UBERON:0000203!1.15e-51!25;UBERON:0000073!3.08e-51!94;UBERON:0001016!3.08e-51!94;UBERON:0000955!2.23e-50!69;UBERON:0006238!2.23e-50!69;UBERON:0003056!1.09e-45!61;UBERON:0003075!4.59e-44!86;UBERON:0007284!4.59e-44!86;UBERON:0002346!1.10e-41!90;UBERON:0007023!1.82e-38!115;UBERON:0000033!1.57e-29!123;UBERON:0000153!2.06e-29!129;UBERON:0007811!2.06e-29!129;UBERON:0004121!5.52e-27!169;UBERON:0000924!4.07e-26!173;UBERON:0006601!4.07e-26!173;UBERON:0002420!1.08e-21!9;UBERON:0007245!1.08e-21!9;UBERON:0010009!1.08e-21!9;UBERON:0010011!1.08e-21!9;UBERON:0000454!1.08e-21!9;UBERON:0002308!2.55e-21!9;UBERON:0000125!2.55e-21!9;UBERON:0000200!8.93e-20!6;UBERON:0001871!1.26e-19!7;UBERON:0001872!5.09e-17!5;UBERON:0002021!9.13e-17!5;UBERON:0000025!2.55e-16!194;UBERON:0009663!5.07e-16!7;UBERON:0000369!1.29e-13!4;UBERON:0002435!1.29e-13!4;UBERON:0000204!1.29e-13!4;UBERON:0010082!1.29e-13!4;UBERON:0000064!2.73e-13!219;UBERON:0000477!1.90e-12!286;UBERON:0004111!4.66e-12!241;UBERON:0002771!8.29e-11!3;UBERON:0000349!9.23e-11!5;UBERON:0000483!1.00e-10!309;UBERON:0000119!1.61e-10!312;UBERON:0005383!1.80e-10!3;UBERON:0005382!1.80e-10!3;UBERON:0006331!1.37e-09!3;UBERON:0000988!1.42e-09!3;UBERON:0000475!2.20e-09!365;UBERON:0000481!2.04e-08!347;UBERON:0001873!6.02e-08!2;UBERON:0010122!6.02e-08!2;UBERON:0001870!7.35e-08!2;UBERON:0000062!1.71e-07!511;UBERON:0001876!1.78e-07!2;UBERON:0002148!4.74e-07!2;UBERON:0009662!4.74e-07!2;UBERON:0000922!9.87e-07!612 | |ontology_enrichment_uberon=UBERON:0001893!4.29e-72!34;UBERON:0002020!5.32e-72!34;UBERON:0003528!5.32e-72!34;UBERON:0002791!4.32e-69!33;UBERON:0001869!6.30e-67!32;UBERON:0002780!5.51e-63!41;UBERON:0001890!5.51e-63!41;UBERON:0006240!5.51e-63!41;UBERON:0003080!2.52e-61!42;UBERON:0001049!8.00e-60!57;UBERON:0005068!8.00e-60!57;UBERON:0006241!8.00e-60!57;UBERON:0007135!8.00e-60!57;UBERON:0001950!2.88e-59!20;UBERON:0002619!3.51e-59!22;UBERON:0001017!3.84e-55!82;UBERON:0005743!7.87e-55!86;UBERON:0002616!5.46e-54!59;UBERON:0000956!1.15e-51!25;UBERON:0000203!1.15e-51!25;UBERON:0000073!3.08e-51!94;UBERON:0001016!3.08e-51!94;UBERON:0000955!2.23e-50!69;UBERON:0006238!2.23e-50!69;UBERON:0003056!1.09e-45!61;UBERON:0003075!4.59e-44!86;UBERON:0007284!4.59e-44!86;UBERON:0002346!1.10e-41!90;UBERON:0007023!1.82e-38!115;UBERON:0000033!1.57e-29!123;UBERON:0000153!2.06e-29!129;UBERON:0007811!2.06e-29!129;UBERON:0004121!5.52e-27!169;UBERON:0000924!4.07e-26!173;UBERON:0006601!4.07e-26!173;UBERON:0002420!1.08e-21!9;UBERON:0007245!1.08e-21!9;UBERON:0010009!1.08e-21!9;UBERON:0010011!1.08e-21!9;UBERON:0000454!1.08e-21!9;UBERON:0002308!2.55e-21!9;UBERON:0000125!2.55e-21!9;UBERON:0000200!8.93e-20!6;UBERON:0001871!1.26e-19!7;UBERON:0001872!5.09e-17!5;UBERON:0002021!9.13e-17!5;UBERON:0000025!2.55e-16!194;UBERON:0009663!5.07e-16!7;UBERON:0000369!1.29e-13!4;UBERON:0002435!1.29e-13!4;UBERON:0000204!1.29e-13!4;UBERON:0010082!1.29e-13!4;UBERON:0000064!2.73e-13!219;UBERON:0000477!1.90e-12!286;UBERON:0004111!4.66e-12!241;UBERON:0002771!8.29e-11!3;UBERON:0000349!9.23e-11!5;UBERON:0000483!1.00e-10!309;UBERON:0000119!1.61e-10!312;UBERON:0005383!1.80e-10!3;UBERON:0005382!1.80e-10!3;UBERON:0006331!1.37e-09!3;UBERON:0000988!1.42e-09!3;UBERON:0000475!2.20e-09!365;UBERON:0000481!2.04e-08!347;UBERON:0001873!6.02e-08!2;UBERON:0010122!6.02e-08!2;UBERON:0001870!7.35e-08!2;UBERON:0000062!1.71e-07!511;UBERON:0001876!1.78e-07!2;UBERON:0002148!4.74e-07!2;UBERON:0009662!4.74e-07!2;UBERON:0000922!9.87e-07!612 | ||
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|short_description=p18@LRRC7 | |short_description=p18@LRRC7 | ||
}} | }} |
Latest revision as of 03:33, 19 September 2015
Short description: | p18@LRRC7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -314bp_to_ENST00000310961_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data