FFCP PHASE1:Hg19::chr3:35683620..35683628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10777 | |EntrezGene=10777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |HGNC=16968 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBL0 | |UniProt=Q9UBL0 | ||
|association_with_transcript=-28bp_to_ENST00000187397_5end | |association_with_transcript=-28bp_to_ENST00000187397_5end | ||
|cluster_id=chr3:35683620..35683628,+ | |||
|coexpression_cluster_id=C1213 | |coexpression_cluster_id=C1213 | ||
|description=CAGE_peak_49_at_ARPP21_5end | |description=CAGE_peak_49_at_ARPP21_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000784!2.17e-31!3;CL:0000451!5.48e-09!10 | |ontology_enrichment_celltype=CL:0000784!2.17e-31!3;CL:0000451!5.48e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.51e-53;3!CL:0000817;2.21e-40;1!CL:0000451;1.95e-15;10 | |ontology_enrichment_celltype_v019=CL:0000784;2.51e-53;3!CL:0000817;2.21e-40;1!CL:0000451;1.95e-15;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.87e-53,3;CL:0000451,2.02e-15,10;CL:0000817,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p49@ARPP21 | |short_description=p49@ARPP21 | ||
}} | }} |
Latest revision as of 01:14, 18 September 2015
Short description: | p49@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_ARPP21_5end |
Coexpression cluster: | C1213_thymus_Dendritic_CD4_non_chronic_vein_CD133 |
Association with transcript: | -28bp_to_ENST00000187397_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | Q9UBL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.87e-53 | 3 |
dendritic cell | 2.02e-15 | 10 |
precursor B cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.81e-40 | 4 |
hemolymphoid system gland | 1.81e-40 | 4 |
thymic region | 1.81e-40 | 4 |
pharyngeal gland | 1.81e-40 | 4 |
thymus primordium | 1.81e-40 | 4 |
pharyngeal epithelium | 2.08e-27 | 6 |
hemopoietic organ | 1.14e-23 | 7 |
immune organ | 1.14e-23 | 7 |
neck | 6.39e-17 | 10 |
gland of gut | 6.39e-17 | 10 |
chordate pharynx | 6.39e-17 | 10 |
pharyngeal region of foregut | 6.39e-17 | 10 |
pharynx | 1.74e-15 | 11 |
entire pharyngeal arch endoderm | 1.74e-15 | 11 |
early pharyngeal endoderm | 1.74e-15 | 11 |
pharyngeal arch system | 7.10e-10 | 18 |
upper respiratory tract | 2.08e-09 | 19 |