FFCP PHASE1:Hg19::chr1:161053609..161053621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_uc001fxp.1_5end | |association_with_transcript=-5bp_to_uc001fxp.1_5end | ||
|cluster_id=chr1:161053609..161053621,+ | |||
|coexpression_cluster_id=C1007 | |coexpression_cluster_id=C1007 | ||
|description=CAGE_peak_1_at_uc001fxp.1_5end | |description=CAGE_peak_1_at_uc001fxp.1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.68e-09!42;CL:0000860!1.50e-08!45;CL:0002009!2.31e-07!65;CL:0000349!3.75e-07!3;CL:0002577!3.75e-07!3;CL:0000557!5.00e-07!71;CL:0002541!5.83e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.68e-09!42;CL:0000860!1.50e-08!45;CL:0002009!2.31e-07!65;CL:0000349!3.75e-07!3;CL:0002577!3.75e-07!3;CL:0000557!5.00e-07!71;CL:0002541!5.83e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.53e-41;19!CL:0002577;4.56e-25;3!CL:0002536;2.25e-17;2!CL:0002537;1.68e-15;5!CL:0002541;4.35e-12;3!CL:0000313;4.15e-09;1 | |ontology_enrichment_celltype_v019=CL:0000349;1.53e-41;19!CL:0002577;4.56e-25;3!CL:0002536;2.25e-17;2!CL:0002537;1.68e-15;5!CL:0002541;4.35e-12;3!CL:0000313;4.15e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.35e-41,19;CL:0002577,3.57e-25,3;CL:0002536,2.44e-17,2;CL:0002537,1.60e-15,5;CL:0002541,4.35e-12,3;CL:0000313,5.72e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.03e-09;1!UBERON:0000358;2.35e-09;1 | |ontology_enrichment_development_v019=UBERON:0003124;1.03e-09;1!UBERON:0000358;2.35e-09;1 | ||
|ontology_enrichment_disease=DOID:1749!8.93e-07!14 | |ontology_enrichment_disease=DOID:1749!8.93e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2152;4.15e-09;1 | |ontology_enrichment_disease_v019=DOID:2152;4.15e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,5.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.26e-19!14;UBERON:0000158!1.26e-19!14;UBERON:0003124!2.52e-14!7;UBERON:0000478!1.14e-13!24;UBERON:0004923!5.64e-10!57;UBERON:0001987!4.97e-09!4;UBERON:0004340!4.97e-09!4;UBERON:0000305!1.46e-07!7;UBERON:0000476!5.83e-07!3;UBERON:0000920!5.83e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!1.26e-19!14;UBERON:0000158!1.26e-19!14;UBERON:0003124!2.52e-14!7;UBERON:0000478!1.14e-13!24;UBERON:0004923!5.64e-10!57;UBERON:0001987!4.97e-09!4;UBERON:0004340!4.97e-09!4;UBERON:0000305!1.46e-07!7;UBERON:0000476!5.83e-07!3;UBERON:0000920!5.83e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.29e-47;24!UBERON:0005631;1.32e-39;10!UBERON:0000158;1.32e-39;10!UBERON:0001987;5.32e-33;4!UBERON:0000305;2.88e-29;7!UBERON:0003124;4.35e-12;3!UBERON:0000920;4.35e-12;3!UBERON:0004911;4.15e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0000478;5.29e-47;24!UBERON:0005631;1.32e-39;10!UBERON:0000158;1.32e-39;10!UBERON:0001987;5.32e-33;4!UBERON:0000305;2.88e-29;7!UBERON:0003124;4.35e-12;3!UBERON:0000920;4.35e-12;3!UBERON:0004911;4.15e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.57e-69,14;UBERON:0000158,4.57e-69,14;UBERON:0000478,4.88e-47,24;UBERON:0003124,6.41e-42,7;UBERON:0001987,4.17e-33,4;UBERON:0004340,4.17e-33,4;UBERON:0000305,2.88e-29,7;UBERON:0004871,1.33e-25,8;UBERON:0004923,8.60e-16,66;UBERON:0000920,4.35e-12,3;UBERON:0004911,5.72e-09,1 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,2.00146596706261,0,0,0,0,0,0,0.697801167972428,5.89791704751465,4.74780560811216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.77408061658038,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,1.01778767145695,0,0.970336244751265,0.464858073811369,1.23350366406548,0.929119112685311,0,0,0,0,0,0,2.44715041405386,1.91034305040492,0.449446968890169,0.918251677112708,0,1.27867425159808,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.213455115606889,7.88131685760275,1.66435439510497,17.2362467197918,0.248107807818777,0.306923946576125,0,0.384417447767103,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.98818933778395,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,5.96861211844225,4.75143489332222,18.4296421259539,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.0769502585037971,0,0,0.0897576444097721,0.869178975376065,6.38002319463839,0.641183153813036,11.72676507241,0,0,0,0,0,0,0.189753732724185,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0.670869375198532,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2894749388661,0,0,0,0,0,0,0.078493092850514,0,3.36326595976547,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669888618013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60698544745092,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684466602170562,0.0673520530145875,0,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0 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|phase1_expression=0.363356758541113,0,0.140954404095971,2.00146596706261,0,0,0,0,0,0,0.697801167972428,5.89791704751465,4.74780560811216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.77408061658038,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,1.01778767145695,0,0.970336244751265,0.464858073811369,1.23350366406548,0.929119112685311,0,0,0,0,0,0,2.44715041405386,1.91034305040492,0.449446968890169,0.918251677112708,0,1.27867425159808,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.213455115606889,7.88131685760275,1.66435439510497,17.2362467197918,0.248107807818777,0.306923946576125,0,0.384417447767103,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.98818933778395,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,5.96861211844225,4.75143489332222,18.4296421259539,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.0769502585037971,0,0,0.0897576444097721,0.869178975376065,6.38002319463839,0.641183153813036,11.72676507241,0,0,0,0,0,0,0.189753732724185,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0.670869375198532,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2894749388661,0,0,0,0,0,0,0.078493092850514,0,3.36326595976547,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669888618013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60698544745092,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684466602170562,0.0673520530145875,0,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p1@uc001fxp.1 | |short_description=p1@uc001fxp.1 | ||
}} | }} |
Latest revision as of 23:30, 27 July 2015
Short description: | p1@uc001fxp.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001fxp.1_5end |
Coexpression cluster: | C1007_amniotic_chorionic_Placental_Amniotic_placenta_rectal_umbilical |
Association with transcript: | -5bp_to_uc001fxp.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.35e-41 | 19 |
placental epithelial cell | 3.57e-25 | 3 |
amniotic epithelial cell | 2.44e-17 | 2 |
amnion mesenchymal stem cell | 1.60e-15 | 5 |
chorionic membrane mesenchymal stem cell | 4.35e-12 | 3 |
serous secreting cell | 5.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.57e-69 | 14 |
membranous layer | 4.57e-69 | 14 |
extraembryonic structure | 4.88e-47 | 24 |
chorion | 6.41e-42 | 7 |
placenta | 4.17e-33 | 4 |
allantois | 4.17e-33 | 4 |
amnion | 2.88e-29 | 7 |
somatic layer of lateral plate mesoderm | 1.33e-25 | 8 |
organ component layer | 8.60e-16 | 66 |
egg chorion | 4.35e-12 | 3 |
epithelium of female gonad | 5.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.72e-09 | 1 |