FFCP PHASE1:Hg19::chr11:1861786..1861804,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1861786..1861804,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_at_chr11:1861786..1861804,+ | |description=CAGE_peak_at_chr11:1861786..1861804,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!3.07e-11!140;CL:0000784!1.04e-10!3;CL:0000037!2.30e-10!172;CL:0000566!2.30e-10!172;CL:0000766!2.39e-10!76;CL:0002057!2.79e-10!42;CL:0000988!3.11e-10!182;CL:0000763!5.09e-10!112;CL:0000049!5.09e-10!112;CL:0000451!1.26e-09!10;CL:0000860!2.17e-09!45;CL:0002194!7.61e-08!63;CL:0000576!7.61e-08!63;CL:0000040!7.61e-08!63;CL:0000559!7.61e-08!63;CL:0002009!1.68e-07!65;CL:0002032!5.27e-07!165;CL:0000837!5.27e-07!165;CL:0000839!9.84e-07!70 | |ontology_enrichment_celltype=CL:0000738!3.07e-11!140;CL:0000784!1.04e-10!3;CL:0000037!2.30e-10!172;CL:0000566!2.30e-10!172;CL:0000766!2.39e-10!76;CL:0002057!2.79e-10!42;CL:0000988!3.11e-10!182;CL:0000763!5.09e-10!112;CL:0000049!5.09e-10!112;CL:0000451!1.26e-09!10;CL:0000860!2.17e-09!45;CL:0002194!7.61e-08!63;CL:0000576!7.61e-08!63;CL:0000040!7.61e-08!63;CL:0000559!7.61e-08!63;CL:0002009!1.68e-07!65;CL:0002032!5.27e-07!165;CL:0000837!5.27e-07!165;CL:0000839!9.84e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.45e-17;3!CL:0000771;1.81e-07;2!CL:0000094;4.99e-07;8 | |ontology_enrichment_celltype_v019=CL:0000784;1.45e-17;3!CL:0000771;1.81e-07;2!CL:0000094;4.99e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.39e-17,3;CL:0000771,1.75e-07,2;CL:0000094,4.99e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.24e-14;1!UBERON:0008814;9.87e-08;2!UBERON:0010056;9.87e-08;2 | |ontology_enrichment_development_v019=UBERON:0004874;6.24e-14;1!UBERON:0008814;9.87e-08;2!UBERON:0010056;9.87e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.01e-10!3;UBERON:0001033!3.01e-10!3;UBERON:0010056!3.01e-10!3;UBERON:0002390!3.53e-09!102;UBERON:0003061!3.53e-09!102;UBERON:0002193!8.41e-09!112;UBERON:0001630!7.62e-08!2;UBERON:0005090!7.62e-08!2;UBERON:0000341!1.02e-07!2;UBERON:0003127!6.60e-07!2 | |ontology_enrichment_uberon=UBERON:0001723!3.01e-10!3;UBERON:0001033!3.01e-10!3;UBERON:0010056!3.01e-10!3;UBERON:0002390!3.53e-09!102;UBERON:0003061!3.53e-09!102;UBERON:0002193!8.41e-09!112;UBERON:0001630!7.62e-08!2;UBERON:0005090!7.62e-08!2;UBERON:0000341!1.02e-07!2;UBERON:0003127!6.60e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;3.82e-26;2!UBERON:0001630;3.82e-26;2!UBERON:0000341;1.19e-25;2!UBERON:0001723;4.26e-18;3!UBERON:0001033;4.26e-18;3!UBERON:0002426;5.15e-14;1!UBERON:0003831;5.15e-14;1!UBERON:0003898;5.15e-14;1!UBERON:0004830;5.15e-14;1!UBERON:0003830;5.15e-14;1!UBERON:0005175;5.15e-14;1!UBERON:0001774;5.15e-14;1!UBERON:0001103;5.15e-14;1!UBERON:0000989;6.24e-14;1!UBERON:0001389;6.24e-14;1!UBERON:0000026;6.24e-14;1!UBERON:0008784;6.24e-14;1!UBERON:0006058;6.24e-14;1!UBERON:0008811;6.24e-14;1!UBERON:0003663;6.24e-14;1!UBERON:0004256;6.24e-14;1!UBERON:0004708;6.24e-14;1!UBERON:0002101;6.24e-14;1!UBERON:0004709;6.24e-14;1!UBERON:0002529;6.24e-14;1!UBERON:0010538;6.24e-14;1!UBERON:0003661;6.24e-14;1!UBERON:0010890;6.24e-14;1!UBERON:0002471;6.24e-14;1!UBERON:0001383;6.24e-14;1!UBERON:0010758;6.24e-14;1!UBERON:0010707;6.24e-14;1!UBERON:0000978;6.24e-14;1!UBERON:0002103;6.24e-14;1!UBERON:0001665;6.24e-14;1!UBERON:0003823;6.24e-14;1!UBERON:0000154;6.24e-14;1!UBERON:0010709;6.24e-14;1!UBERON:0001134;7.30e-13;16!UBERON:0002036;7.30e-13;16!UBERON:0000974;3.35e-09;6!UBERON:0003127;2.32e-07;2!UBERON:0002385;5.89e-07;31!UBERON:0001015;5.89e-07;31!UBERON:0000383;5.89e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0005090;3.82e-26;2!UBERON:0001630;3.82e-26;2!UBERON:0000341;1.19e-25;2!UBERON:0001723;4.26e-18;3!UBERON:0001033;4.26e-18;3!UBERON:0002426;5.15e-14;1!UBERON:0003831;5.15e-14;1!UBERON:0003898;5.15e-14;1!UBERON:0004830;5.15e-14;1!UBERON:0003830;5.15e-14;1!UBERON:0005175;5.15e-14;1!UBERON:0001774;5.15e-14;1!UBERON:0001103;5.15e-14;1!UBERON:0000989;6.24e-14;1!UBERON:0001389;6.24e-14;1!UBERON:0000026;6.24e-14;1!UBERON:0008784;6.24e-14;1!UBERON:0006058;6.24e-14;1!UBERON:0008811;6.24e-14;1!UBERON:0003663;6.24e-14;1!UBERON:0004256;6.24e-14;1!UBERON:0004708;6.24e-14;1!UBERON:0002101;6.24e-14;1!UBERON:0004709;6.24e-14;1!UBERON:0002529;6.24e-14;1!UBERON:0010538;6.24e-14;1!UBERON:0003661;6.24e-14;1!UBERON:0010890;6.24e-14;1!UBERON:0002471;6.24e-14;1!UBERON:0001383;6.24e-14;1!UBERON:0010758;6.24e-14;1!UBERON:0010707;6.24e-14;1!UBERON:0000978;6.24e-14;1!UBERON:0002103;6.24e-14;1!UBERON:0001665;6.24e-14;1!UBERON:0003823;6.24e-14;1!UBERON:0000154;6.24e-14;1!UBERON:0010709;6.24e-14;1!UBERON:0001134;7.30e-13;16!UBERON:0002036;7.30e-13;16!UBERON:0000974;3.35e-09;6!UBERON:0003127;2.32e-07;2!UBERON:0002385;5.89e-07;31!UBERON:0001015;5.89e-07;31!UBERON:0000383;5.89e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,4.08e-26,2;UBERON:0001630,4.08e-26,2;UBERON:0000341,1.27e-25,2;UBERON:0001723,4.26e-18,3;UBERON:0001033,4.26e-18,3;UBERON:0010056,4.26e-18,3;UBERON:0002426,5.15e-14,1;UBERON:0003831,5.15e-14,1;UBERON:0003898,5.15e-14,1;UBERON:0004830,5.15e-14,1;UBERON:0003830,5.15e-14,1;UBERON:0005175,5.15e-14,1;UBERON:0001774,5.15e-14,1;UBERON:0001103,5.15e-14,1;UBERON:0010084,5.15e-14,1;UBERON:0000989,5.85e-14,1;UBERON:0008811,5.85e-14,1;UBERON:0006258,5.85e-14,1;UBERON:0005876,5.85e-14,1;UBERON:0004874,5.85e-14,1;UBERON:0005418,6.65e-14,1;UBERON:0001389,6.65e-14,1;UBERON:0000026,6.65e-14,1;UBERON:0008784,6.65e-14,1;UBERON:0006058,6.65e-14,1;UBERON:0003663,6.65e-14,1;UBERON:0004256,6.65e-14,1;UBERON:0004708,6.65e-14,1;UBERON:0002101,6.65e-14,1;UBERON:0004709,6.65e-14,1;UBERON:0002529,6.65e-14,1;UBERON:0010538,6.65e-14,1;UBERON:0003661,6.65e-14,1;UBERON:0010890,6.65e-14,1;UBERON:0002471,6.65e-14,1;UBERON:0001383,6.65e-14,1;UBERON:0004357,6.65e-14,1;UBERON:0004347,6.65e-14,1;UBERON:0005420,6.65e-14,1;UBERON:0005732,6.65e-14,1;UBERON:0010758,6.65e-14,1;UBERON:0010707,6.65e-14,1;UBERON:0000978,6.65e-14,1;UBERON:0002103,6.65e-14,1;UBERON:0001665,6.65e-14,1;UBERON:0003823,6.65e-14,1;UBERON:0000154,6.65e-14,1;UBERON:0010709,6.65e-14,1;UBERON:0005733,6.65e-14,1;UBERON:0005730,6.65e-14,1;UBERON:0003127,2.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.953962497221368,9.15191857248205,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0,0,0,0,0,0.557409525377156,0,0,0,0.798317485731266,0,2.11673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82835412028668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04640914842423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93937885422871,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,7.12171720906684,4.10651227424988,12.7579587447202,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83821167421766,5.71354635512977,0,0,0,0,0.606351566874658,19.8122240586235,28.7475972911636,0.26940821205835,0.0717222053926763,1.66330178273007,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.953962497221368,9.15191857248205,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0,0,0,0,0,0.557409525377156,0,0,0,0.798317485731266,0,2.11673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82835412028668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04640914842423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93937885422871,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,7.12171720906684,4.10651227424988,12.7579587447202,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83821167421766,5.71354635512977,0,0,0,0,0.606351566874658,19.8122240586235,28.7475972911636,0.26940821205835,0.0717222053926763,1.66330178273007,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr11:1861786..1861804,+ | |short_description=p@chr11:1861786..1861804,+ | ||
}} | }} |
Latest revision as of 20:41, 23 July 2015
Short description: | p@chr11:1861786..1861804, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1861786..1861804, + |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.39e-17 | 3 |
eosinophil | 1.75e-07 | 2 |
granulocyte | 4.99e-07 | 8 |