FFCP PHASE1:Hg19::chr18:27755939..27755949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:27755939..27755949,- | |||
|coexpression_cluster_id=C3714 | |coexpression_cluster_id=C3714 | ||
|description=CAGE_peak_at_chr18:27755939..27755949,- | |description=CAGE_peak_at_chr18:27755939..27755949,- | ||
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|ontology_enrichment_celltype=CL:0002541!2.05e-21!3;CL:0000039!1.21e-09!7;CL:0000586!1.21e-09!7;CL:0000319!1.31e-08!1 | |ontology_enrichment_celltype=CL:0002541!2.05e-21!3;CL:0000039!1.21e-09!7;CL:0000586!1.21e-09!7;CL:0000319!1.31e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;6.23e-18;1!CL:0000039;2.29e-10;7!CL:0000586;2.29e-10;7!CL:1000415;8.32e-10;2!CL:0000054;9.46e-10;2!CL:0000137;9.46e-10;2!CL:0000092;9.46e-10;2!CL:0000159;1.22e-09;2!CL:0002541;9.91e-07;3 | |ontology_enrichment_celltype_v019=CL:0000319;6.23e-18;1!CL:0000039;2.29e-10;7!CL:0000586;2.29e-10;7!CL:1000415;8.32e-10;2!CL:0000054;9.46e-10;2!CL:0000137;9.46e-10;2!CL:0000092;9.46e-10;2!CL:0000159;1.22e-09;2!CL:0002541;9.91e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,5.26e-18,1;CL:0000039,2.24e-10,7;CL:0000586,2.24e-10,7;CL:1000415,8.69e-10,2;CL:0000054,9.46e-10,2;CL:0000137,9.46e-10,2;CL:0000092,9.46e-10,2;CL:0000159,1.12e-09,2;CL:0002541,9.64e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!1.67e-21!8;DOID:0060085!1.13e-08!1;DOID:3165!1.13e-08!1;DOID:0060121!1.13e-08!1;DOID:2438!1.13e-08!1;DOID:4418!1.13e-08!1;DOID:3030!1.31e-08!1;DOID:1799!1.75e-08!1;DOID:10165!1.75e-08!1;DOID:1798!1.75e-08!1 | |ontology_enrichment_disease=DOID:1036!1.67e-21!8;DOID:0060085!1.13e-08!1;DOID:3165!1.13e-08!1;DOID:0060121!1.13e-08!1;DOID:2438!1.13e-08!1;DOID:4418!1.13e-08!1;DOID:3030!1.31e-08!1;DOID:1799!1.75e-08!1;DOID:10165!1.75e-08!1;DOID:1798!1.75e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060085;3.75e-18;1!DOID:3165;3.75e-18;1!DOID:0060121;3.75e-18;1!DOID:2438;3.75e-18;1!DOID:4418;3.75e-18;1!DOID:3030;6.23e-18;1!DOID:1799;1.33e-17;1!DOID:10165;1.33e-17;1!DOID:1798;1.33e-17;1!DOID:200;9.46e-10;2!DOID:4305;9.46e-10;2!DOID:3095;2.34e-07;22!DOID:2994;2.34e-07;22 | |ontology_enrichment_disease_v019=DOID:0060085;3.75e-18;1!DOID:3165;3.75e-18;1!DOID:0060121;3.75e-18;1!DOID:2438;3.75e-18;1!DOID:4418;3.75e-18;1!DOID:3030;6.23e-18;1!DOID:1799;1.33e-17;1!DOID:10165;1.33e-17;1!DOID:1798;1.33e-17;1!DOID:200;9.46e-10;2!DOID:4305;9.46e-10;2!DOID:3095;2.34e-07;22!DOID:2994;2.34e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.75e-18,1;DOID:3165,3.75e-18,1;DOID:0060121,3.75e-18,1;DOID:2438,3.75e-18,1;DOID:4418,3.75e-18,1;DOID:3030,5.26e-18,1;DOID:1799,1.03e-17,1;DOID:10165,1.03e-17,1;DOID:1798,1.03e-17,1;DOID:200,9.46e-10,2;DOID:4305,9.46e-10,2;DOID:3095,2.31e-07,22;DOID:2994,2.31e-07,22;DOID:0050687,7.67e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.05e-21!3;UBERON:0000920!2.05e-21!3;UBERON:0003124!4.37e-16!7;UBERON:0005631!3.81e-12!14;UBERON:0000158!3.81e-12!14;UBERON:0001282!9.79e-09!1;UBERON:0009842!9.79e-09!1;UBERON:0003704!9.79e-09!1;UBERON:0001171!9.79e-09!1;UBERON:0001172!9.79e-09!1;UBERON:0000478!5.34e-07!24 | |ontology_enrichment_uberon=UBERON:0000476!2.05e-21!3;UBERON:0000920!2.05e-21!3;UBERON:0003124!4.37e-16!7;UBERON:0005631!3.81e-12!14;UBERON:0000158!3.81e-12!14;UBERON:0001282!9.79e-09!1;UBERON:0009842!9.79e-09!1;UBERON:0003704!9.79e-09!1;UBERON:0001171!9.79e-09!1;UBERON:0001172!9.79e-09!1;UBERON:0000478!5.34e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.90e-18;1!UBERON:0009842;2.90e-18;1!UBERON:0003704;2.90e-18;1!UBERON:0001171;2.90e-18;1!UBERON:0001172;2.90e-18;1!UBERON:0002294;1.21e-10;7!UBERON:0001173;1.21e-10;7!UBERON:0002110;5.97e-07;3!UBERON:0001280;5.97e-07;3!UBERON:0004647;5.97e-07;3!UBERON:0003124;9.91e-07;3!UBERON:0000920;9.91e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001282;2.90e-18;1!UBERON:0009842;2.90e-18;1!UBERON:0003704;2.90e-18;1!UBERON:0001171;2.90e-18;1!UBERON:0001172;2.90e-18;1!UBERON:0002294;1.21e-10;7!UBERON:0001173;1.21e-10;7!UBERON:0002110;5.97e-07;3!UBERON:0001280;5.97e-07;3!UBERON:0004647;5.97e-07;3!UBERON:0003124;9.91e-07;3!UBERON:0000920;9.91e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.66e-18,1;UBERON:0009842,2.66e-18,1;UBERON:0003704,2.66e-18,1;UBERON:0001171,2.66e-18,1;UBERON:0001172,2.66e-18,1;UBERON:0002294,1.77e-08,9;UBERON:0001173,1.77e-08,9;UBERON:0004912,1.77e-08,9;UBERON:0001280,5.80e-07,3;UBERON:0004647,5.80e-07,3;UBERON:0005171,5.80e-07,3;UBERON:0002110,6.14e-07,3;UBERON:0006242,6.14e-07,3;UBERON:0000920,9.64e-07,3 | |||
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|short_description=p@chr18:27755939..27755949,- | |short_description=p@chr18:27755939..27755949,- | ||
}} | }} |
Latest revision as of 00:16, 26 July 2015
Short description: | p@chr18:27755939..27755949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:27755939..27755949, - |
Coexpression cluster: | C3714_gall_cholangiocellular_chronic_fibrous_teratocarcinoma_mucinous_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 5.26e-18 | 1 |
germ line cell | 2.24e-10 | 7 |
germ cell | 2.24e-10 | 7 |
epithelial cell of gall bladder | 8.69e-10 | 2 |
bone matrix secreting cell | 9.46e-10 | 2 |
osteocyte | 9.46e-10 | 2 |
osteoclast | 9.46e-10 | 2 |
seromucus secreting cell | 1.12e-09 | 2 |
chorionic membrane mesenchymal stem cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.66e-18 | 1 |
acinus | 2.66e-18 | 1 |
intrahepatic bile duct | 2.66e-18 | 1 |
portal lobule | 2.66e-18 | 1 |
hepatic acinus | 2.66e-18 | 1 |
biliary system | 1.77e-08 | 9 |
biliary tree | 1.77e-08 | 9 |
biliary bud | 1.77e-08 | 9 |
liver parenchyma | 5.80e-07 | 3 |
liver lobule | 5.80e-07 | 3 |
hepatic duct | 5.80e-07 | 3 |
gallbladder | 6.14e-07 | 3 |
gall bladder primordium | 6.14e-07 | 3 |
egg chorion | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.75e-18 | 1 |
skin benign neoplasm | 3.75e-18 | 1 |
integumentary system benign neoplasm | 3.75e-18 | 1 |
dermis tumor | 3.75e-18 | 1 |
cutaneous fibrous histiocytoma | 3.75e-18 | 1 |
mucinous adenocarcinoma | 5.26e-18 | 1 |
islet cell tumor | 1.03e-17 | 1 |
endocrine pancreas cancer | 1.03e-17 | 1 |
pancreatic endocrine carcinoma | 1.03e-17 | 1 |
giant cell tumor | 9.46e-10 | 2 |
bone giant cell tumor | 9.46e-10 | 2 |
germ cell and embryonal cancer | 2.31e-07 | 22 |
germ cell cancer | 2.31e-07 | 22 |
cell type cancer | 7.67e-07 | 143 |