FFCP PHASE1:Hg19::chr6:125283436..125283477,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154214 | |EntrezGene=154214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |HGNC=21487 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2M4 | |UniProt=F2Z2M4 | ||
|association_with_transcript=-213bp_to_ENST00000521654_5end | |association_with_transcript=-213bp_to_ENST00000521654_5end | ||
|cluster_id=chr6:125283436..125283477,+ | |||
|coexpression_cluster_id=C383 | |coexpression_cluster_id=C383 | ||
|description=CAGE_peak_5_at_RNF217_5end | |description=CAGE_peak_5_at_RNF217_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.02e-08;19 | |ontology_enrichment_celltype_v019=CL:0000349;2.02e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.02e-08,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.15e-12!659;UBERON:0000475!1.34e-08!365;UBERON:0000467!1.38e-08!625;UBERON:0000480!2.22e-08!626;UBERON:0000033!1.76e-07!123;UBERON:0000924!2.80e-07!173;UBERON:0006601!2.80e-07!173;UBERON:0004121!3.75e-07!169;UBERON:0000922!4.54e-07!612;UBERON:0000153!6.60e-07!129;UBERON:0007811!6.60e-07!129;UBERON:0004923!7.40e-07!57 | |ontology_enrichment_uberon=UBERON:0000468!2.15e-12!659;UBERON:0000475!1.34e-08!365;UBERON:0000467!1.38e-08!625;UBERON:0000480!2.22e-08!626;UBERON:0000033!1.76e-07!123;UBERON:0000924!2.80e-07!173;UBERON:0006601!2.80e-07!173;UBERON:0004121!3.75e-07!169;UBERON:0000922!4.54e-07!612;UBERON:0000153!6.60e-07!129;UBERON:0007811!6.60e-07!129;UBERON:0004923!7.40e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.45e-10;10!UBERON:0000158;6.45e-10;10!UBERON:0000478;4.29e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0005631;6.45e-10;10!UBERON:0000158;6.45e-10;10!UBERON:0000478;4.29e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.71e-10,66;UBERON:0005631,6.85e-10,14;UBERON:0000158,6.85e-10,14;UBERON:0006876,3.06e-07,11;UBERON:0003688,7.92e-07,6;UBERON:0002358,7.92e-07,6;UBERON:0003684,7.92e-07,6;UBERON:0001178,7.92e-07,6 | |||
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| ||
|short_description=p5@RNF217 | |short_description=p5@RNF217 | ||
}} | }} |
Latest revision as of 06:53, 20 September 2015
Short description: | p5@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNF217_5end |
Coexpression cluster: | C383_oral_liposarcoma_small_Small_skeletal_amniotic_Astrocyte |
Association with transcript: | -213bp_to_ENST00000521654_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | F2Z2M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.02e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 3.71e-10 | 66 |
extraembryonic membrane | 6.85e-10 | 14 |
membranous layer | 6.85e-10 | 14 |
vasculature of organ | 3.06e-07 | 11 |
omentum | 7.92e-07 | 6 |
peritoneum | 7.92e-07 | 6 |
abdominal cavity | 7.92e-07 | 6 |
visceral peritoneum | 7.92e-07 | 6 |