FFCP PHASE1:Hg19::chr1:78958320..78958332,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:78958320..78958332,+
|short_description=p2@PTGFR
|description=CAGE_peak_2_at_PTGFR_5end
|association_with_transcript=-96bp_to_AB464672,AY337000,DQ890957,DQ...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5737 | |EntrezGene=5737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9600 | |HGNC=9600 | ||
|TSSclassifier=strong | |||
|UniProt=P43088 | |UniProt=P43088 | ||
|association_with_transcript=-96bp_to_AB464672,AY337000,DQ890957,DQ894120_5end | |||
|cluster_id=chr1:78958320..78958332,+ | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_2_at_PTGFR_5end | |||
|id=chr1:78958320..78958332,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.37e-19;3!CL:0002561;2.79e-14;2!CL:0002602;2.31e-13;2!CL:0000594;2.59e-09;3!CL:0000135;3.32e-09;3!CL:0000388;3.32e-09;3!CL:0002591;2.24e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.46e-19,3;CL:0002561,3.08e-14,2;CL:0002602,1.86e-13,2;CL:0000135,2.53e-09,3;CL:0000388,2.53e-09,3;CL:0000594,2.75e-09,3;CL:0002591,2.63e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.15e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.55e-10!95;UBERON:0007023!5.58e-10!115;UBERON:0000475!1.98e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.71e-31;5!UBERON:0002216;3.71e-31;5!UBERON:0011134;3.71e-31;5!UBERON:0002209;3.71e-31;5!UBERON:0002213;3.71e-31;5!UBERON:0007844;3.71e-31;5!UBERON:0011138;3.71e-31;5!UBERON:0001130;3.71e-31;5!UBERON:0001066;3.71e-31;5!UBERON:0001468;3.71e-31;5!UBERON:0002242;1.37e-19;3!UBERON:0004905;1.94e-19;8!UBERON:0000982;1.94e-19;8!UBERON:0004770;1.94e-19;8!UBERON:0005933;2.79e-14;2!UBERON:0005942;2.79e-14;2!UBERON:0005932;2.79e-14;2!UBERON:0006444;2.31e-13;2!UBERON:0001995;2.31e-13;2!UBERON:0004715;2.31e-13;2!UBERON:0000075;1.25e-09;16!UBERON:0001723;2.19e-09;3!UBERON:0001033;2.19e-09;3!UBERON:0002418;3.32e-09;3!UBERON:0007846;3.32e-09;3!UBERON:0004755;3.32e-09;3!UBERON:0000043;3.32e-09;3!UBERON:0007845;3.32e-09;3!UBERON:0004765;4.10e-08;26!UBERON:0002346;1.24e-07;4!UBERON:0000923;1.24e-07;4!UBERON:0010316;1.24e-07;4!UBERON:0005291;1.24e-07;4!UBERON:0007029;2.24e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.18e-31,5;UBERON:0002216,3.18e-31,5;UBERON:0011134,3.18e-31,5;UBERON:0002209,3.18e-31,5;UBERON:0002213,3.18e-31,5;UBERON:0005856,3.18e-31,5;UBERON:0005866,3.18e-31,5;UBERON:0005863,3.18e-31,5;UBERON:0007844,3.18e-31,5;UBERON:0011138,3.18e-31,5;UBERON:0001130,3.18e-31,5;UBERON:0001066,3.18e-31,5;UBERON:0001468,3.18e-31,5;UBERON:0002242,1.46e-19,3;UBERON:0003068,1.46e-19,3;UBERON:0002328,1.46e-19,3;UBERON:0004880,1.46e-19,3;UBERON:0004905,1.76e-19,8;UBERON:0000982,1.76e-19,8;UBERON:0004770,1.76e-19,8;UBERON:0005933,3.08e-14,2;UBERON:0005942,3.08e-14,2;UBERON:0005932,3.08e-14,2;UBERON:0006444,1.86e-13,2;UBERON:0001995,1.86e-13,2;UBERON:0004715,1.86e-13,2;UBERON:0000075,1.20e-09,16;UBERON:0007846,2.53e-09,3;UBERON:0000043,2.53e-09,3;UBERON:0007845,2.53e-09,3;UBERON:0001723,2.75e-09,3;UBERON:0001033,2.75e-09,3;UBERON:0010056,2.75e-09,3;UBERON:0002418,2.87e-09,3;UBERON:0004755,2.87e-09,3;UBERON:0007029,1.58e-07,1 | |||
|phase1_expression=0,1.07050261945492,0,2.00146596706261,0,0,0,0,5.74608382039645,0,0,0,0,2.72285976512103,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.59331170856906,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.352303495931295,0.485618833104395,0,2.04154171254893,0,3.92637968467909,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0.831192346452549,0,0,0,0,0.179389635688862,0.213557388818567,0.635795703478686,0,0.103052529238439,0,0,0.506328996723799,0.292311015483596,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10804720835177,6.49691533502627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0.258543431515556,7.15312891703765,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,2.69921281782108,2.00068208423871,2.71265023699736,0,0,0,0.35142424497814,1.20378439891088,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0,0.511707249066704,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.767518373630648,0,3.54486808065303,1.16013355131383,0.170453254832202,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0.589494246078727,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19762268907841,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0.397429223405979,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0.653174720218818,0,0,4.25970054463554,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.366078794705889,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.568209015825267,1.50940741051545,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,6.80239744325385,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0,0,0,106.57797408193,0,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0,1.48798007266701,2.77305377178851,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,5.660635445321,1.02669990325584,0.202056159043763,0.143444410785353,0,0,0,0,0,2.34640942403454,0.733448665097199,0,0.665756774185513,0.603821380773079,0 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|phase1_expression=0,1.07050261945492,0,2.00146596706261,0,0,0,0,5.74608382039645,0,0,0,0,2.72285976512103,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.59331170856906,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.352303495931295,0.485618833104395,0,2.04154171254893,0,3.92637968467909,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0.831192346452549,0,0,0,0,0.179389635688862,0.213557388818567,0.635795703478686,0,0.103052529238439,0,0,0.506328996723799,0.292311015483596,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10804720835177,6.49691533502627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0.258543431515556,7.15312891703765,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,2.69921281782108,2.00068208423871,2.71265023699736,0,0,0,0.35142424497814,1.20378439891088,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0,0.511707249066704,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.767518373630648,0,3.54486808065303,1.16013355131383,0.170453254832202,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0.589494246078727,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19762268907841,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0.397429223405979,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0.653174720218818,0,0,4.25970054463554,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.366078794705889,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.568209015825267,1.50940741051545,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,6.80239744325385,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0,0,0,106.57797408193,0,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0,1.48798007266701,2.77305377178851,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,5.660635445321,1.02669990325584,0.202056159043763,0.143444410785353,0,0,0,0,0,2.34640942403454,0.733448665097199,0,0.665756774185513,0.603821380773079,0 | ||
|short_description=p2@PTGFR | |||
}} | }} |
Latest revision as of 08:39, 19 September 2015
Short description: | p2@PTGFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTGFR_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -96bp_to_AB464672, AY337000, DQ890957, DQ894120_5end |
EntrezGene: | PTGFR |
HGNC: | 9600 |
UniProt: | P43088 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.46e-19 | 3 |
outer root sheath cell | 3.08e-14 | 2 |
annulus pulposus cell | 1.86e-13 | 2 |
fibrocyte | 2.53e-09 | 3 |
tendon cell | 2.53e-09 | 3 |
skeletal muscle satellite cell | 2.75e-09 | 3 |
smooth muscle cell of the pulmonary artery | 2.63e-07 | 1 |