FFCP PHASE1:Hg19::chr2:216003243..216003282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26154 | |EntrezGene=26154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14637 | |HGNC=14637 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UK0 | |UniProt=Q86UK0 | ||
|association_with_transcript=-92bp_to_ENST00000272895,NM_173076,uc002vew.2,uc010zjn.1_5end | |association_with_transcript=-92bp_to_ENST00000272895,NM_173076,uc002vew.2,uc010zjn.1_5end | ||
|cluster_id=chr2:216003243..216003282,- | |||
|coexpression_cluster_id=C120 | |coexpression_cluster_id=C120 | ||
|description=CAGE_peak_2_at_ABCA12_5end | |description=CAGE_peak_2_at_ABCA12_5end | ||
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|ontology_enrichment_celltype=CL:0002076!5.84e-15!43;CL:0000066!4.89e-12!254;CL:0002251!1.84e-10!21;CL:0000223!4.28e-10!59;CL:0000622!6.26e-07!5 | |ontology_enrichment_celltype=CL:0002076!5.84e-15!43;CL:0000066!4.89e-12!254;CL:0002251!1.84e-10!21;CL:0000223!4.28e-10!59;CL:0000622!6.26e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.93e-18;42!CL:0000622;5.76e-13;5!CL:0002251;1.17e-12;20!CL:0002327;5.67e-11;4!CL:0002368;9.88e-11;13!CL:0000154;9.89e-11;6!CL:0002623;1.37e-08;3!CL:0002621;5.40e-08;3!CL:0002328;2.20e-07;3!CL:0002577;3.33e-07;3!CL:0000362;4.41e-07;9!CL:0000150;5.30e-07;9!CL:0001014;7.51e-07;2!CL:0001016;7.51e-07;2 | |ontology_enrichment_celltype_v019=CL:0002076;5.93e-18;42!CL:0000622;5.76e-13;5!CL:0002251;1.17e-12;20!CL:0002327;5.67e-11;4!CL:0002368;9.88e-11;13!CL:0000154;9.89e-11;6!CL:0002623;1.37e-08;3!CL:0002621;5.40e-08;3!CL:0002328;2.20e-07;3!CL:0002577;3.33e-07;3!CL:0000362;4.41e-07;9!CL:0000150;5.30e-07;9!CL:0001014;7.51e-07;2!CL:0001016;7.51e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.89e-22,42;CL:0000223,4.33e-16,58;CL:0000066,9.09e-14,253;CL:0000622,5.71e-13,5;CL:0002251,1.21e-12,20;CL:0002327,4.08e-11,4;CL:0000154,9.81e-11,6;CL:0002368,1.09e-10,13;CL:0002623,1.50e-08,3;CL:0002621,6.49e-08,3;CL:0002328,2.18e-07,3;CL:0002577,2.74e-07,3;CL:0000362,4.27e-07,9;CL:0000150,5.27e-07,9;CL:0001014,7.52e-07,2;CL:0001016,7.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;7.02e-08;58 | |ontology_enrichment_development_v019=CL:0000223;7.02e-08;58 | ||
|ontology_enrichment_disease=DOID:1749!5.45e-08!14 | |ontology_enrichment_disease=DOID:1749!5.45e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.11e-11;4!DOID:1612;3.11e-11;4!DOID:1749;8.12e-08;14 | |ontology_enrichment_disease_v019=DOID:5093;3.11e-11;4!DOID:1612;3.11e-11;4!DOID:1749;8.12e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.85e-11,4;DOID:1612,2.85e-11,4;DOID:1749,6.79e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.46e-09!14;UBERON:0000158!3.46e-09!14;UBERON:0000478!9.03e-09!24;UBERON:0003124!2.48e-07!7;UBERON:0000166!2.86e-07!21 | |ontology_enrichment_uberon=UBERON:0005631!3.46e-09!14;UBERON:0000158!3.46e-09!14;UBERON:0000478!9.03e-09!24;UBERON:0003124!2.48e-07!7;UBERON:0000166!2.86e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;2.73e-11;19!UBERON:0000166;2.73e-11;19!UBERON:0001911;5.67e-11;4!UBERON:0000165;2.53e-10;28!UBERON:0001987;4.62e-09;4!UBERON:0001949;5.40e-08;3!UBERON:0004815;2.20e-07;3!UBERON:0002031;2.20e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000161;2.73e-11;19!UBERON:0000166;2.73e-11;19!UBERON:0001911;5.67e-11;4!UBERON:0000165;2.53e-10;28!UBERON:0001987;4.62e-09;4!UBERON:0001949;5.40e-08;3!UBERON:0004815;2.20e-07;3!UBERON:0002031;2.20e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,7.43e-14,22;UBERON:0000161,1.20e-13,36;UBERON:0001004,2.33e-11,74;UBERON:0001911,4.08e-11,4;UBERON:0005333,4.08e-11,4;UBERON:0008425,4.08e-11,4;UBERON:0005311,4.08e-11,4;UBERON:0004119,1.30e-10,160;UBERON:0000925,1.30e-10,160;UBERON:0006595,1.30e-10,160;UBERON:0000165,7.93e-10,29;UBERON:0000930,7.93e-10,29;UBERON:0001987,4.04e-09,4;UBERON:0004340,4.04e-09,4;UBERON:0003102,4.28e-09,99;UBERON:0001949,6.49e-08,3;UBERON:0003124,8.14e-08,7;UBERON:0005631,2.05e-07,14;UBERON:0000158,2.05e-07,14;UBERON:0004815,2.18e-07,3;UBERON:0002031,2.18e-07,3;UBERON:0004923,3.04e-07,66;UBERON:0003100,3.86e-07,41 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0,3.132949635666,4.18713006194723,3.22714203386085,0,0,0,2.75826367343678,1.204823675113,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,1.09288586487763,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0.622422070799533,0,0,0,0,0,0,1.1409436430889,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0,0,0.169560592310488,5.7978255948989,4.09119180886252,1.14721838155602,0,0,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.514703430895577,17.9990468070146,8.99214026060957,4.02115889646523,0.370353780634118,0,0,0,0,0.469634776943287,0,0,0,4.74122638775565,10.3018339451385,0,0,0,0,0.335964256397719,0.708875486211932,22.2105136303064,10.4628217865026,1.91691339582606,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,1.03473071292505,0,0,0,0,0,0,0,0,1.5156378572313,1.66435439510497,1.20956117331872,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,1.00253235151642,7.09023614806402,0,0,0,0.451199612907412,0.462092022626489,0,0,0.633309773357254,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0.165018999841176,2.87132768998086,8.45078319847478,0,0,0.154048617114644,0,0.137836572484531,0.322260734604821,0,0.0852266274161009,0.0890320356467374,10.0823798370197,4.22818148203234,4.97689578728878,7.48567578331069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0,0,0.188287601553558,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,11.4597352674091,0.593929361665277,10.1363031692747,0,0,0,0,0,0,0,0,0,3.07712013652674,0,0,17.5440751182097,0,0.197286811273867,0,0,0,0,0,9.11497163798316,20.9029399990908,0.724999575434793,0.341380344856499,0,1.65471377237555,0.344743373241465,0,0,0,0,0,0,0,0,0,34.9953598139294,3.92446318369365,0,0.922255617552241,0.0897576444097721,0,1.91400695839152,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.617819694732514,0.313265848516366,0,0,0,0,12.3268709927217,0,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,2.56148591426813,0,0,1.95984794828755,0.174118413160805,1.92199335066233,0.171986032471617,0,0,0.0821154570532092,4.55848377495571,0,0.90392296312213,0.274083849293502,0,0.0633107959558787,1.36885967914362,0,0,1.39866726707491,0.288180834308212,0,0,0,0,9.89914945390541,0.135904206073614,0.209205692624666,0,0,0,0,0,0,1.57732412567589,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.681017030557878,0,0,0,39.3704310215126,115.296491229135,0,25.157601569945,0,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0.342173675768659,1.40963004463334,0.106787412567695,0.314408610199332,0,0,0,0,8.29843635101236,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.601030435988874,0,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.537266523244462,0,0.219284049578707,0,0,0,0.76872455576384,0,0,0.138258436151731,0,0,0.981392365535065,0,0,0,0.39997479170986,0,0,0,0,7.55349341685,3.73246356019784,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0110672871046,3.65706142377995,2.75142897782519,0.231051332300676,0,0,0.397832444232549,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,8.9318012110073,0.175871244359621,1.78867398695433,0.535701835878287,0,0.606965604236632,1.13831095675649,1.33053555243958,0,0,0,0.0657727735628491,0,0,0,0,0,0,1.51149313853035,0,0,0.158013611732727,0.116241425368125,0,0,2.07216164163037,7.34089451503985,67.743446857781,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,36.9140354724946,0,0,0,0,0,0,0,0,1.41095188908457,0,0.235676547101626,0,0,0,0,0,0,7.49558669436967,3.74963271071881,4.58763333230399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.918948995348449,0,0,0,0,0,0.852935927603924,0.23806443146374,0.129177819672012,0,0,0,0,20.9008077981083,2.05339980651169,2.82878622661268,3.37094365345579,0.332660356546013,3.33753401304995,0,0,0,2.34640942403454,0.244482888365733,2.03448089157869,2.66302709674205,0,5.12909587685173 | 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| ||
|short_description=p2@ABCA12 | |short_description=p2@ABCA12 | ||
}} | }} |
Latest revision as of 01:37, 20 September 2015
Short description: | p2@ABCA12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCA12_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | -92bp_to_ENST00000272895, NM_173076, uc002vew.2, uc010zjn.1_5end |
EntrezGene: | ABCA12 |
HGNC: | 14637 |
UniProt: | Q86UK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.89e-22 | 42 |
endodermal cell | 4.33e-16 | 58 |
epithelial cell | 9.09e-14 | 253 |
acinar cell | 5.71e-13 | 5 |
epithelial cell of alimentary canal | 1.21e-12 | 20 |
mammary gland epithelial cell | 4.08e-11 | 4 |
protein secreting cell | 9.81e-11 | 6 |
respiratory epithelial cell | 1.09e-10 | 13 |
acinar cell of salivary gland | 1.50e-08 | 3 |
gingival epithelial cell | 6.49e-08 | 3 |
bronchial epithelial cell | 2.18e-07 | 3 |
placental epithelial cell | 2.74e-07 | 3 |
epidermal cell | 4.27e-07 | 9 |
glandular epithelial cell | 5.27e-07 | 9 |
CD1a-positive Langerhans cell | 7.52e-07 | 2 |
immature CD1a-positive Langerhans cell | 7.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 7.43e-14 | 22 |
orifice | 1.20e-13 | 36 |
respiratory system | 2.33e-11 | 74 |
mammary gland | 4.08e-11 | 4 |
mammary bud | 4.08e-11 | 4 |
mammary ridge | 4.08e-11 | 4 |
mammary placode | 4.08e-11 | 4 |
endoderm-derived structure | 1.30e-10 | 160 |
endoderm | 1.30e-10 | 160 |
presumptive endoderm | 1.30e-10 | 160 |
mouth | 7.93e-10 | 29 |
stomodeum | 7.93e-10 | 29 |
placenta | 4.04e-09 | 4 |
allantois | 4.04e-09 | 4 |
surface structure | 4.28e-09 | 99 |
gingival epithelium | 6.49e-08 | 3 |
chorion | 8.14e-08 | 7 |
extraembryonic membrane | 2.05e-07 | 14 |
membranous layer | 2.05e-07 | 14 |
lower respiratory tract epithelium | 2.18e-07 | 3 |
epithelium of bronchus | 2.18e-07 | 3 |
organ component layer | 3.04e-07 | 66 |
female organism | 3.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.85e-11 | 4 |
breast cancer | 2.85e-11 | 4 |
squamous cell carcinoma | 6.79e-08 | 14 |