FFCP PHASE1:Hg19::chr17:1588116..1588119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1588116..1588119,+ | |||
|description=CAGE_peak_at_chr17:1588116..1588119,+ | |description=CAGE_peak_at_chr17:1588116..1588119,+ | ||
|id=chr17:1588116..1588119,+ | |id=chr17:1588116..1588119,+ | ||
|ontology_enrichment_celltype=CL:0002371!1.48e-07!591;CL:0000144!5.43e-07!625 | |ontology_enrichment_celltype=CL:0002371!1.48e-07!591;CL:0000144!5.43e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002188;2.31e-09;5!CL:0000235;4.49e-08;6!CL:1000746;6.29e-07;7!CL:1000612;6.29e-07;7!CL:0002262;9.43e-07;2!CL:1000398;9.43e-07;2 | |ontology_enrichment_celltype_v019=CL:0002188;2.31e-09;5!CL:0000235;4.49e-08;6!CL:1000746;6.29e-07;7!CL:1000612;6.29e-07;7!CL:0002262;9.43e-07;2!CL:1000398;9.43e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.27e-09,5;CL:0000235,4.34e-08,6;CL:1000746,6.20e-07,7;CL:1000612,6.20e-07,7;CL:0002262,9.44e-07,2;CL:1000398,9.44e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;6.18e-07;15!UBERON:0000074;6.29e-07;7!UBERON:0001229;6.29e-07;7!UBERON:0001281;9.43e-07;2!UBERON:0003497;9.43e-07;2!UBERON:0003909;9.43e-07;2!UBERON:0003835;9.43e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000353;6.18e-07;15!UBERON:0000074;6.29e-07;7!UBERON:0001229;6.29e-07;7!UBERON:0001281;9.43e-07;2!UBERON:0003497;9.43e-07;2!UBERON:0003909;9.43e-07;2!UBERON:0003835;9.43e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,6.12e-07,15;UBERON:0010532,6.20e-07,7;UBERON:0000074,6.20e-07,7;UBERON:0001229,6.20e-07,7;UBERON:0001230,6.20e-07,7;UBERON:0003220,6.20e-07,7;UBERON:0005749,6.20e-07,7;UBERON:0004199,6.20e-07,7;UBERON:0004209,6.20e-07,7;UBERON:0004198,6.20e-07,7;UBERON:0001281,9.44e-07,2;UBERON:0003497,9.44e-07,2;UBERON:0003909,9.44e-07,2;UBERON:0003835,9.44e-07,2 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,2.09340350391728,0.218441372130172,0.263766978228454,0,0,0.672325146451775,1.80808358407193,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0.376627918784408,0.229240217243854,0.328402357799783,0.0787107813136792,0,0,0.77408061658038,0.919421224478927,0.90361775633475,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.25618263945135,0.390178042679635,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,2.43806866313962,0,0.383587685530591,0,0,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,0.0654895377488563,0.364295288292542,0,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0.198762407366705,0.860234595106124,0,0,0.838998872419812,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0.436094052142534,0,0.506522046658319,0.132409180813219,0,0.354668382198357,0,0,0.74000264525148,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0,0.624320153660641,0.570471821544449,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0.375355559615893,0,1.31693286264251,0.612975591598039,0,0.113432183160021,0.538168907066586,0,0.423863802319124,0.300091096084402,0,1.03056216018252,0.558350568994769,0.337552664482532,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.302256294682921,0,0.193260853163297,0,0.573609190778008,0.243947412259191,0.265059536642971,0.464775771478074,0,0.504641701751257,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0,0.435758888184812,0,0,0,0.769494313892781,0,4.20725321410337,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0.301586917234893,0,0,0,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0.570762456703795,0,0.858486162094873,0.492434012174795,0.468008530278475,0.594524649154913,0,0.335964256397719,0.141775097242386,0,0,0.766765358330422,0,0.088048434013226,0.207328115540772,0.144119953416961,0.37872730027914,0.253991577168676,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,2.43247561282381,0,2.10833939483032,0,2.29723871668228,0,0.434343920002738,0.205476322550383,0,0.224170287987055,0,0.431255149719035,0,0,0,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0,0,0.271265023699736,0.831883446123229,0.713715955188647,0.946214490203608,0.468565659970853,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0.767309866440312,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.524497659837696,0.902399225814824,0.0770153371044148,0,0,0,0,0.170093705276516,1.51141141271498,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0.464845549297286,0,0.6970372701606,0.308033580176089,0,0,0.9266210955196,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,1.01455188481352,0,0,0.286822704408103,0.491245205065606,0.35667105148125,0,0.422215270595328,0,0.379473173765715,1.04980416073495,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,0,0,0.671028323677248,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0.994147647766298,0,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0,0.306806047506464,0.492339221844278,0,0.179736702294654,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0.156980256395025,0,0,0.19606253431774,0,0,0.317873157960757,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0.23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| ||
|short_description=p@chr17:1588116..1588119,+ | |short_description=p@chr17:1588116..1588119,+ | ||
}} | }} |
Latest revision as of 14:04, 25 July 2015
Short description: | p@chr17:1588116..1588119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1588116..1588119, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.27e-09 | 5 |
macrophage | 4.34e-08 | 6 |
glomerular cell | 6.20e-07 | 7 |
kidney corpuscule cell | 6.20e-07 | 7 |
endothelial cell of sinusoid | 9.44e-07 | 2 |
endothelial cell of hepatic sinusoid | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
parenchyma | 6.12e-07 | 15 |
primitive nephron | 6.20e-07 | 7 |
renal glomerulus | 6.20e-07 | 7 |
renal corpuscle | 6.20e-07 | 7 |
glomerular capsule | 6.20e-07 | 7 |
metanephric mesenchyme | 6.20e-07 | 7 |
glomerular tuft | 6.20e-07 | 7 |
S-shaped body | 6.20e-07 | 7 |
renal vesicle | 6.20e-07 | 7 |
comma-shaped body | 6.20e-07 | 7 |
hepatic sinusoid | 9.44e-07 | 2 |
abdomen blood vessel | 9.44e-07 | 2 |
sinusoid | 9.44e-07 | 2 |
abdominal segment blood vessel | 9.44e-07 | 2 |