FFCP PHASE1:Hg19::chr12:323699..323719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6539 | |EntrezGene=6539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11045 | |HGNC=11045 | ||
|TSSclassifier=strong | |||
|UniProt=P48065 | |UniProt=P48065 | ||
|association_with_transcript=-10bp_to_ENST00000428720_5end | |association_with_transcript=-10bp_to_ENST00000428720_5end | ||
|cluster_id=chr12:323699..323719,- | |||
|coexpression_cluster_id=C105 | |coexpression_cluster_id=C105 | ||
|description=CAGE_peak_1_at_SLC6A12_5end | |description=CAGE_peak_1_at_SLC6A12_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.66e-14!42;CL:0000860!5.88e-13!45;CL:0000453!5.20e-10!5;CL:0002009!4.06e-09!65;CL:0000557!1.06e-08!71;CL:0002194!1.73e-07!63;CL:0000576!1.73e-07!63;CL:0000040!1.73e-07!63;CL:0000559!1.73e-07!63;CL:0000839!5.49e-07!70 | |ontology_enrichment_celltype=CL:0002057!2.66e-14!42;CL:0000860!5.88e-13!45;CL:0000453!5.20e-10!5;CL:0002009!4.06e-09!65;CL:0000557!1.06e-08!71;CL:0002194!1.73e-07!63;CL:0000576!1.73e-07!63;CL:0000040!1.73e-07!63;CL:0000559!1.73e-07!63;CL:0000839!5.49e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.09e-08;2!CL:0001016;1.09e-08;2!CL:0002575;3.31e-08;2!CL:0000453;3.40e-07;5 | |ontology_enrichment_celltype_v019=CL:0001014;1.09e-08;2!CL:0001016;1.09e-08;2!CL:0002575;3.31e-08;2!CL:0000453;3.40e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-09,42;CL:0002057,1.23e-09,42;CL:0001014,9.89e-09,2;CL:0001016,9.89e-09,2;CL:0002009,3.35e-08,61;CL:0000473,3.97e-08,48;CL:0000234,3.97e-08,48;CL:0002575,4.19e-08,2;CL:0000453,3.06e-07,5;CL:0000557,3.21e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-09;82!CL:0002057;3.87e-07;42 | |ontology_enrichment_development_v019=UBERON:0006601;1.12e-09;82!CL:0002057;3.87e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.44e-48!57;UBERON:0005068!8.44e-48!57;UBERON:0006241!8.44e-48!57;UBERON:0007135!8.44e-48!57;UBERON:0002616!1.76e-38!59;UBERON:0001017!1.62e-37!82;UBERON:0002020!8.67e-36!34;UBERON:0003528!8.67e-36!34;UBERON:0001893!9.19e-36!34;UBERON:0002780!1.51e-35!41;UBERON:0001890!1.51e-35!41;UBERON:0006240!1.51e-35!41;UBERON:0005743!3.76e-35!86;UBERON:0003080!1.72e-34!42;UBERON:0000955!2.23e-34!69;UBERON:0006238!2.23e-34!69;UBERON:0002791!4.31e-34!33;UBERON:0001869!2.70e-32!32;UBERON:0000073!3.17e-32!94;UBERON:0001016!3.17e-32!94;UBERON:0003075!3.27e-32!86;UBERON:0007284!3.27e-32!86;UBERON:0002346!3.44e-30!90;UBERON:0007023!3.26e-29!115;UBERON:0002619!1.83e-27!22;UBERON:0001950!4.04e-27!20;UBERON:0000956!1.33e-23!25;UBERON:0000203!1.33e-23!25;UBERON:0003056!5.67e-21!61;UBERON:0000033!2.59e-15!123;UBERON:0000153!6.53e-15!129;UBERON:0007811!6.53e-15!129;UBERON:0003076!4.70e-14!15;UBERON:0003057!4.70e-14!15;UBERON:0002308!6.15e-14!9;UBERON:0000125!6.15e-14!9;UBERON:0004121!5.75e-13!169;UBERON:0000200!1.31e-12!6;UBERON:0000924!2.22e-12!173;UBERON:0006601!2.22e-12!173;UBERON:0000062!4.35e-11!511;UBERON:0004732!4.40e-11!13;UBERON:0002420!8.15e-11!9;UBERON:0007245!8.15e-11!9;UBERON:0010009!8.15e-11!9;UBERON:0010011!8.15e-11!9;UBERON:0000454!8.15e-11!9;UBERON:0009663!1.67e-10!7;UBERON:0001872!5.50e-10!5;UBERON:0004733!1.20e-09!12;UBERON:0002028!1.20e-09!12;UBERON:0007277!1.20e-09!12;UBERON:0002298!4.86e-09!8;UBERON:0001871!5.76e-09!7;UBERON:0000369!1.73e-08!4;UBERON:0002435!1.73e-08!4;UBERON:0000204!1.73e-08!4;UBERON:0010082!1.73e-08!4;UBERON:0000025!4.75e-08!194;UBERON:0001737!5.00e-08!9;UBERON:0002680!1.50e-07!9;UBERON:0001895!1.50e-07!9;UBERON:0010092!1.50e-07!9;UBERON:0000064!1.69e-07!219;UBERON:0002771!2.94e-07!3;UBERON:0000923!4.10e-07!604;UBERON:0005291!4.10e-07!604;UBERON:0006598!4.10e-07!604;UBERON:0002532!4.10e-07!604;UBERON:0006331!4.40e-07!3;UBERON:0002371!4.48e-07!80;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0000988!6.80e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!8.44e-48!57;UBERON:0005068!8.44e-48!57;UBERON:0006241!8.44e-48!57;UBERON:0007135!8.44e-48!57;UBERON:0002616!1.76e-38!59;UBERON:0001017!1.62e-37!82;UBERON:0002020!8.67e-36!34;UBERON:0003528!8.67e-36!34;UBERON:0001893!9.19e-36!34;UBERON:0002780!1.51e-35!41;UBERON:0001890!1.51e-35!41;UBERON:0006240!1.51e-35!41;UBERON:0005743!3.76e-35!86;UBERON:0003080!1.72e-34!42;UBERON:0000955!2.23e-34!69;UBERON:0006238!2.23e-34!69;UBERON:0002791!4.31e-34!33;UBERON:0001869!2.70e-32!32;UBERON:0000073!3.17e-32!94;UBERON:0001016!3.17e-32!94;UBERON:0003075!3.27e-32!86;UBERON:0007284!3.27e-32!86;UBERON:0002346!3.44e-30!90;UBERON:0007023!3.26e-29!115;UBERON:0002619!1.83e-27!22;UBERON:0001950!4.04e-27!20;UBERON:0000956!1.33e-23!25;UBERON:0000203!1.33e-23!25;UBERON:0003056!5.67e-21!61;UBERON:0000033!2.59e-15!123;UBERON:0000153!6.53e-15!129;UBERON:0007811!6.53e-15!129;UBERON:0003076!4.70e-14!15;UBERON:0003057!4.70e-14!15;UBERON:0002308!6.15e-14!9;UBERON:0000125!6.15e-14!9;UBERON:0004121!5.75e-13!169;UBERON:0000200!1.31e-12!6;UBERON:0000924!2.22e-12!173;UBERON:0006601!2.22e-12!173;UBERON:0000062!4.35e-11!511;UBERON:0004732!4.40e-11!13;UBERON:0002420!8.15e-11!9;UBERON:0007245!8.15e-11!9;UBERON:0010009!8.15e-11!9;UBERON:0010011!8.15e-11!9;UBERON:0000454!8.15e-11!9;UBERON:0009663!1.67e-10!7;UBERON:0001872!5.50e-10!5;UBERON:0004733!1.20e-09!12;UBERON:0002028!1.20e-09!12;UBERON:0007277!1.20e-09!12;UBERON:0002298!4.86e-09!8;UBERON:0001871!5.76e-09!7;UBERON:0000369!1.73e-08!4;UBERON:0002435!1.73e-08!4;UBERON:0000204!1.73e-08!4;UBERON:0010082!1.73e-08!4;UBERON:0000025!4.75e-08!194;UBERON:0001737!5.00e-08!9;UBERON:0002680!1.50e-07!9;UBERON:0001895!1.50e-07!9;UBERON:0010092!1.50e-07!9;UBERON:0000064!1.69e-07!219;UBERON:0002771!2.94e-07!3;UBERON:0000923!4.10e-07!604;UBERON:0005291!4.10e-07!604;UBERON:0006598!4.10e-07!604;UBERON:0002532!4.10e-07!604;UBERON:0006331!4.40e-07!3;UBERON:0002371!4.48e-07!80;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0000988!6.80e-07!3 | ||
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|short_description=p1@SLC6A12 | |short_description=p1@SLC6A12 | ||
}} | }} |
Latest revision as of 04:50, 18 September 2015
Short description: | p1@SLC6A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A12_5end |
Coexpression cluster: | C105_heart_skeletal_occipital_hippocampus_acute_Sebocyte_penis |
Association with transcript: | -10bp_to_ENST00000428720_5end |
EntrezGene: | SLC6A12 |
HGNC: | 11045 |
UniProt: | P48065 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-09 | 42 |
CD1a-positive Langerhans cell | 9.89e-09 | 2 |
immature CD1a-positive Langerhans cell | 9.89e-09 | 2 |
macrophage dendritic cell progenitor | 3.35e-08 | 61 |
defensive cell | 3.97e-08 | 48 |
phagocyte | 3.97e-08 | 48 |
central nervous system pericyte | 4.19e-08 | 2 |
Langerhans cell | 3.06e-07 | 5 |
granulocyte monocyte progenitor cell | 3.21e-07 | 67 |