FFCP PHASE1:Hg19::chr1:158323244..158323269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET31 | |UniProt=E7ET31 | ||
|association_with_transcript=0bp_to_ENST00000434258,uc010pid.1_5end | |association_with_transcript=0bp_to_ENST00000434258,uc010pid.1_5end | ||
|cluster_id=chr1:158323244..158323269,+ | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_3_at_CD1E_5end | |description=CAGE_peak_3_at_CD1E_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.21e-15;2 | |ontology_enrichment_development_v019=UBERON:0006965;2.21e-15;2 | ||
|ontology_enrichment_disease=DOID:2531!5.53e-07!51;DOID:0060083!5.53e-07!51 | |ontology_enrichment_disease=DOID:2531!5.53e-07!51;DOID:0060083!5.53e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.58e-33!7;UBERON:0002106!1.05e-19!3;UBERON:0004854!1.05e-19!3;UBERON:0009034!1.05e-19!3;UBERON:0002095!1.05e-19!3;UBERON:0004782!1.05e-19!3;UBERON:0003281!1.05e-19!3;UBERON:0009664!1.05e-19!3;UBERON:0002296!1.05e-19!3;UBERON:0005602!1.05e-19!3;UBERON:0001179!1.05e-19!3;UBERON:0006293!1.05e-19!3;UBERON:0002370!1.66e-15!4;UBERON:0005058!1.66e-15!4;UBERON:0009113!1.66e-15!4;UBERON:0003295!1.66e-15!4;UBERON:0005562!1.66e-15!4;UBERON:0006834!2.38e-15!1;UBERON:0002372!3.17e-15!1;UBERON:0001961!3.17e-15!1;UBERON:0001744!3.17e-15!1;UBERON:0001735!3.17e-15!1;UBERON:0000974!1.30e-13!10;UBERON:0001042!1.67e-13!10;UBERON:0009145!1.67e-13!10;UBERON:0006562!2.49e-12!11;UBERON:0003351!1.18e-10!6;UBERON:0005057!4.38e-09!26;UBERON:0000341!1.86e-08!2;UBERON:0000945!5.56e-08!8;UBERON:0010039!5.56e-08!8;UBERON:0001557!2.27e-07!19;UBERON:0003408!9.76e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!7.58e-33!7;UBERON:0002106!1.05e-19!3;UBERON:0004854!1.05e-19!3;UBERON:0009034!1.05e-19!3;UBERON:0002095!1.05e-19!3;UBERON:0004782!1.05e-19!3;UBERON:0003281!1.05e-19!3;UBERON:0009664!1.05e-19!3;UBERON:0002296!1.05e-19!3;UBERON:0005602!1.05e-19!3;UBERON:0001179!1.05e-19!3;UBERON:0006293!1.05e-19!3;UBERON:0002370!1.66e-15!4;UBERON:0005058!1.66e-15!4;UBERON:0009113!1.66e-15!4;UBERON:0003295!1.66e-15!4;UBERON:0005562!1.66e-15!4;UBERON:0006834!2.38e-15!1;UBERON:0002372!3.17e-15!1;UBERON:0001961!3.17e-15!1;UBERON:0001744!3.17e-15!1;UBERON:0001735!3.17e-15!1;UBERON:0000974!1.30e-13!10;UBERON:0001042!1.67e-13!10;UBERON:0009145!1.67e-13!10;UBERON:0006562!2.49e-12!11;UBERON:0003351!1.18e-10!6;UBERON:0005057!4.38e-09!26;UBERON:0000341!1.86e-08!2;UBERON:0000945!5.56e-08!8;UBERON:0010039!5.56e-08!8;UBERON:0001557!2.27e-07!19;UBERON:0003408!9.76e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.02e-57;2!UBERON:0005058;2.02e-57;2!UBERON:0009113;2.02e-57;2!UBERON:0004177;1.02e-23;5!UBERON:0005057;1.02e-23;5!UBERON:0000341;2.74e-15;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;2.02e-57;2!UBERON:0005058;2.02e-57;2!UBERON:0009113;2.02e-57;2!UBERON:0004177;1.02e-23;5!UBERON:0005057;1.02e-23;5!UBERON:0000341;2.74e-15;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.37e-29,4;UBERON:0005058,2.37e-29,4;UBERON:0009113,2.37e-29,4;UBERON:0003295,2.37e-29,4;UBERON:0005562,2.37e-29,4;UBERON:0000974,4.28e-26,10;UBERON:0003351,5.89e-20,6;UBERON:0004177,2.90e-17,7;UBERON:0005057,2.90e-17,7;UBERON:0000341,2.74e-15,2;UBERON:0003408,2.12e-12,10;UBERON:0001042,2.12e-12,10;UBERON:0009145,2.12e-12,10;UBERON:0006562,2.30e-11,11;UBERON:0009722,2.30e-11,11;UBERON:0007690,2.30e-11,11;UBERON:0008814,2.60e-07,18;UBERON:0001557,5.66e-07,19 | |||
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|short_description=p3@CD1E | |short_description=p3@CD1E | ||
}} | }} |
Latest revision as of 20:56, 17 September 2015
Short description: | p3@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD1E_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 0bp_to_ENST00000434258, uc010pid.1_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | E7ET31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.37e-29 | 4 |
hemolymphoid system gland | 2.37e-29 | 4 |
thymic region | 2.37e-29 | 4 |
pharyngeal gland | 2.37e-29 | 4 |
thymus primordium | 2.37e-29 | 4 |
neck | 4.28e-26 | 10 |
pharyngeal epithelium | 5.89e-20 | 6 |
hemopoietic organ | 2.90e-17 | 7 |
immune organ | 2.90e-17 | 7 |
throat | 2.74e-15 | 2 |
gland of gut | 2.12e-12 | 10 |
chordate pharynx | 2.12e-12 | 10 |
pharyngeal region of foregut | 2.12e-12 | 10 |
pharynx | 2.30e-11 | 11 |
entire pharyngeal arch endoderm | 2.30e-11 | 11 |
early pharyngeal endoderm | 2.30e-11 | 11 |
pharyngeal arch system | 2.60e-07 | 18 |
upper respiratory tract | 5.66e-07 | 19 |