FFCP PHASE1:Hg19::chr1:51763661..51763672,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22996 | |EntrezGene=22996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18657 | |HGNC=18657 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530004_5end | |association_with_transcript=0bp_to_ENST00000530004_5end | ||
|cluster_id=chr1:51763661..51763672,- | |||
|coexpression_cluster_id=C177 | |coexpression_cluster_id=C177 | ||
|description=CAGE_peak_11_at_TTC39A_5end | |description=CAGE_peak_11_at_TTC39A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000784!1.07e-07!3 | |ontology_enrichment_celltype=CL:0000784!1.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002535;7.78e-14;2!CL:0002567;1.41e-09;3!CL:0002327;1.69e-07;4 | |ontology_enrichment_celltype_v019=CL:0002535;7.78e-14;2!CL:0002567;1.41e-09;3!CL:0002327;1.69e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.30e-14,2;CL:0002567,1.54e-09,3;CL:0002327,1.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.93e-26;1 | |ontology_enrichment_development_v019=UBERON:0008425;5.93e-26;1 | ||
|ontology_enrichment_disease=DOID:5093!2.58e-21!4;DOID:1612!2.58e-21!4;DOID:299!9.73e-07!25 | |ontology_enrichment_disease=DOID:5093!2.58e-21!4;DOID:1612!2.58e-21!4;DOID:299!9.73e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.26e-25;4!DOID:1612;1.26e-25;4!DOID:1909;6.43e-14;2 | |ontology_enrichment_disease_v019=DOID:5093;1.26e-25;4!DOID:1612;1.26e-25;4!DOID:1909;6.43e-14;2 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.11e-25,4;DOID:1612,1.11e-25,4;DOID:1909,6.43e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0000310!6.30e-13!10;UBERON:0001443!1.00e-11!11;UBERON:0002148!1.56e-10!2;UBERON:0009662!1.56e-10!2;UBERON:0000988!2.67e-07!3;UBERON:0006331!2.67e-07!3 | |ontology_enrichment_uberon=UBERON:0000310!6.30e-13!10;UBERON:0001443!1.00e-11!11;UBERON:0002148!1.56e-10!2;UBERON:0009662!1.56e-10!2;UBERON:0000988!2.67e-07!3;UBERON:0006331!2.67e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.78e-14;2!UBERON:0004801;7.78e-14;2!UBERON:0000310;6.94e-11;10!UBERON:0001443;5.54e-10;11!UBERON:0001911;1.69e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0006955;7.78e-14;2!UBERON:0004801;7.78e-14;2!UBERON:0000310;6.94e-11;10!UBERON:0001443;5.54e-10;11!UBERON:0001911;1.69e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,7.30e-14,2;UBERON:0004801,7.30e-14,2;UBERON:0000310,6.61e-11,10;UBERON:0001443,5.29e-10,11;UBERON:0001911,1.59e-07,4;UBERON:0005333,1.59e-07,4;UBERON:0008425,1.59e-07,4;UBERON:0005311,1.59e-07,4 | |||
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|short_description=p11@TTC39A | |short_description=p11@TTC39A | ||
}} | }} |
Latest revision as of 11:36, 18 September 2015
Short description: | p11@TTC39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TTC39A_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | 0bp_to_ENST00000530004_5end |
EntrezGene: | TTC39A |
HGNC: | 18657 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.30e-14 | 2 |
light melanocyte | 1.54e-09 | 3 |
mammary gland epithelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 7.30e-14 | 2 |
cervix epithelium | 7.30e-14 | 2 |
breast | 6.61e-11 | 10 |
chest | 5.29e-10 | 11 |
mammary gland | 1.59e-07 | 4 |
mammary bud | 1.59e-07 | 4 |
mammary ridge | 1.59e-07 | 4 |
mammary placode | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.11e-25 | 4 |
breast cancer | 1.11e-25 | 4 |
melanoma | 6.43e-14 | 2 |