FFCP PHASE1:Hg19::chr1:4663749..4663761,+: Difference between revisions
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|id=chr1:4663749..4663761,+
|short_description=p@chr1:4663749..4663761,+
|description=CAGE_peak_at_chr1:4663749..4663761,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:4663749..4663761,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr1:4663749..4663761,+ | |||
|id=chr1:4663749..4663761,+ | |||
|ontology_enrichment_celltype=CL:0000094!9.24e-11!8;CL:0000081!1.89e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.22e-15;3!CL:0000094;1.57e-15;8!CL:0000764;2.57e-11;2!CL:0000558;2.57e-11;2!CL:0000081;3.11e-11;11!CL:0000097;7.96e-10;5!CL:0000239;1.17e-07;3!CL:1000615;1.17e-07;3!CL:0002306;1.17e-07;3!CL:0000226;2.59e-07;3!CL:0000842;2.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.05e-15,3;CL:0000094,1.53e-15,8;CL:0000764,2.57e-11,2;CL:0000765,2.57e-11,2;CL:0000050,2.57e-11,2;CL:0000038,2.57e-11,2;CL:0000558,2.57e-11,2;CL:0000547,2.57e-11,2;CL:0000549,2.57e-11,2;CL:0000550,2.57e-11,2;CL:0000552,2.57e-11,2;CL:0000081,3.04e-11,11;CL:0000097,7.38e-10,5;CL:0002028,7.38e-10,5;CL:0000239,1.13e-07,3;CL:1000615,1.13e-07,3;CL:0002306,1.13e-07,3;CL:0000226,1.99e-07,3;CL:0000842,1.99e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.81e-17!15;UBERON:0000179!1.81e-17!15;UBERON:0000463!1.81e-17!15;UBERON:0007023!7.38e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-40;15!UBERON:0000179;1.67e-40;15!UBERON:0000463;1.67e-40;15!UBERON:0002390;8.82e-17;32!UBERON:0002193;1.63e-09;42!UBERON:0006853;1.17e-07;3!UBERON:0007685;1.17e-07;3!UBERON:0004134;1.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.24e-40,15;UBERON:0000179,1.24e-40,15;UBERON:0000463,1.24e-40,15;UBERON:0006853,1.13e-07,3;UBERON:0007685,1.13e-07,3;UBERON:0004134,1.13e-07,3;UBERON:0002390,2.15e-07,98;UBERON:0003061,2.15e-07,98 | |||
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| ||
|short_description=p@chr1:4663749..4663761,+ | |||
}} | }} |
Latest revision as of 08:45, 28 July 2015
Short description: | p@chr1:4663749..4663761, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:4663749..4663761, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.05e-15 | 3 |
granulocyte | 1.53e-15 | 8 |
erythroid lineage cell | 2.57e-11 | 2 |
erythroblast | 2.57e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 2.57e-11 | 2 |
erythroid progenitor cell | 2.57e-11 | 2 |
reticulocyte | 2.57e-11 | 2 |
proerythroblast | 2.57e-11 | 2 |
basophilic erythroblast | 2.57e-11 | 2 |
polychromatophilic erythroblast | 2.57e-11 | 2 |
orthochromatic erythroblast | 2.57e-11 | 2 |
blood cell | 3.04e-11 | 11 |
mast cell | 7.38e-10 | 5 |
basophil mast progenitor cell | 7.38e-10 | 5 |
brush border epithelial cell | 1.13e-07 | 3 |
kidney cortex tubule cell | 1.13e-07 | 3 |
epithelial cell of proximal tubule | 1.13e-07 | 3 |
single nucleate cell | 1.99e-07 | 3 |
mononuclear cell | 1.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.24e-40 | 15 |
haemolymphatic fluid | 1.24e-40 | 15 |
organism substance | 1.24e-40 | 15 |
renal cortex tubule | 1.13e-07 | 3 |
region of nephron tubule | 1.13e-07 | 3 |
proximal tubule | 1.13e-07 | 3 |
hematopoietic system | 2.15e-07 | 98 |
blood island | 2.15e-07 | 98 |