FFCP PHASE1:Hg19::chr3:42055402..42055419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22906 | |EntrezGene=22906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29947 | |HGNC=29947 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=108bp_to_ENST00000487159_5end | |association_with_transcript=108bp_to_ENST00000487159_5end | ||
|cluster_id=chr3:42055402..42055419,+ | |||
|description=CAGE_peak_9_at_TRAK1_5end | |description=CAGE_peak_9_at_TRAK1_5end | ||
|id=chr3:42055402..42055419,+ | |id=chr3:42055402..42055419,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.64e-14;3!CL:0000349;9.68e-13;19!CL:0002537;5.62e-08;5!CL:0000134;4.03e-07;55 | |ontology_enrichment_celltype_v019=CL:0002541;6.64e-14;3!CL:0000349;9.68e-13;19!CL:0002537;5.62e-08;5!CL:0000134;4.03e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.29e-14,3;CL:0000349,1.29e-12,19;CL:0002537,8.34e-08,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.56e-09!115 | |ontology_enrichment_uberon=UBERON:0007023!9.56e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.56e-20;10!UBERON:0000158;9.56e-20;10!UBERON:0003124;6.64e-14;3!UBERON:0000920;6.64e-14;3!UBERON:0000478;2.63e-12;24!UBERON:0000305;1.81e-09;7!UBERON:0007100;5.79e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0005631;9.56e-20;10!UBERON:0000158;9.56e-20;10!UBERON:0003124;6.64e-14;3!UBERON:0000920;6.64e-14;3!UBERON:0000478;2.63e-12;24!UBERON:0000305;1.81e-09;7!UBERON:0007100;5.79e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.85e-18,14;UBERON:0000158,9.85e-18,14;UBERON:0000920,7.29e-14,3;UBERON:0000478,2.85e-12,24;UBERON:0003124,4.68e-10,7;UBERON:0000305,2.53e-09,7;UBERON:0004871,3.66e-08,8;UBERON:0004923,1.14e-07,66 | |||
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| ||
|short_description=p9@TRAK1 | |short_description=p9@TRAK1 | ||
}} | }} |
Latest revision as of 05:41, 18 September 2015
Short description: | p9@TRAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TRAK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENST00000487159_5end |
EntrezGene: | TRAK1 |
HGNC: | 29947 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.29e-14 | 3 |
extraembryonic cell | 1.29e-12 | 19 |
amnion mesenchymal stem cell | 8.34e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.85e-18 | 14 |
membranous layer | 9.85e-18 | 14 |
egg chorion | 7.29e-14 | 3 |
extraembryonic structure | 2.85e-12 | 24 |
chorion | 4.68e-10 | 7 |
amnion | 2.53e-09 | 7 |
somatic layer of lateral plate mesoderm | 3.66e-08 | 8 |
organ component layer | 1.14e-07 | 66 |