FFCP PHASE1:Hg19::chr20:5903426..5903436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903426..5903436,- | |||
|coexpression_cluster_id=C377 | |coexpression_cluster_id=C377 | ||
|description=CAGE_peak_at_chr20:5903426..5903436,- | |description=CAGE_peak_at_chr20:5903426..5903436,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.29e-13;2 | |ontology_enrichment_celltype_v019=CL:0002535;1.29e-13;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.21e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.19e-09;3 | |ontology_enrichment_development_v019=UBERON:0006215;1.19e-09;3 | ||
|ontology_enrichment_disease=DOID:169!3.30e-09!6 | |ontology_enrichment_disease=DOID:169!3.30e-09!6 | ||
|ontology_enrichment_disease_v019=DOID:3119;3.76e-08;14 | |ontology_enrichment_disease_v019=DOID:3119;3.76e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,3.76e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000007;5.83e-50;2!UBERON:0003296;1.34e-25;4!UBERON:0010133;1.34e-25;4!UBERON:0001894;4.22e-15;7!UBERON:0006955;1.29e-13;2!UBERON:0004801;1.29e-13;2 | |ontology_enrichment_uberon_v019=UBERON:0000007;5.83e-50;2!UBERON:0003296;1.34e-25;4!UBERON:0010133;1.34e-25;4!UBERON:0001894;4.22e-15;7!UBERON:0006955;1.29e-13;2!UBERON:0004801;1.29e-13;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.00e-50,2;UBERON:0003296,1.11e-25,4;UBERON:0010133,1.11e-25,4;UBERON:0001894,3.79e-15,7;UBERON:0006222,3.79e-15,7;UBERON:0006955,1.21e-13,2;UBERON:0004801,1.21e-13,2;UBERON:0000073,9.26e-08,53;UBERON:0002616,9.26e-08,53;UBERON:0001049,2.27e-07,56;UBERON:0005068,2.27e-07,56;UBERON:0006241,2.27e-07,56;UBERON:0007135,2.27e-07,56;UBERON:0001016,6.21e-07,89 | |||
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| ||
|short_description=p@chr20:5903426..5903436,- | |short_description=p@chr20:5903426..5903436,- | ||
}} | }} |
Latest revision as of 16:01, 28 July 2015
Short description: | p@chr20:5903426..5903436, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903426..5903436, - |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.21e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.00e-50 | 2 |
gland of diencephalon | 1.11e-25 | 4 |
neuroendocrine gland | 1.11e-25 | 4 |
diencephalon | 3.79e-15 | 7 |
future diencephalon | 3.79e-15 | 7 |
uterine epithelium | 1.21e-13 | 2 |
cervix epithelium | 1.21e-13 | 2 |
regional part of nervous system | 9.26e-08 | 53 |
regional part of brain | 9.26e-08 | 53 |
neural tube | 2.27e-07 | 56 |
neural rod | 2.27e-07 | 56 |
future spinal cord | 2.27e-07 | 56 |
neural keel | 2.27e-07 | 56 |
nervous system | 6.21e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.76e-08 | 14 |