FFCP PHASE1:Hg19::chr7:150553527..150553540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_CU680774,JF432306_5end | |association_with_transcript=-18bp_to_CU680774,JF432306_5end | ||
|cluster_id=chr7:150553527..150553540,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_10_at_ABP1_5end | |description=CAGE_peak_10_at_ABP1_5end | ||
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|ontology_enrichment_celltype=CL:0002541!7.04e-35!3;CL:0000453!2.43e-20!5;CL:0000990!1.41e-11!8;CL:0000451!1.43e-09!10 | |ontology_enrichment_celltype=CL:0002541!7.04e-35!3;CL:0000453!2.43e-20!5;CL:0000990!1.41e-11!8;CL:0000451!1.43e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.33e-118;3!CL:0000349;7.67e-34;19!CL:0000723;1.17e-10;61!CL:0000134;6.76e-10;55!CL:0002537;3.49e-09;5 | |ontology_enrichment_celltype_v019=CL:0002541;2.33e-118;3!CL:0000349;7.67e-34;19!CL:0000723;1.17e-10;61!CL:0000134;6.76e-10;55!CL:0002537;3.49e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.33e-118,3;CL:0000349,7.67e-34,19;CL:0002537,3.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.21e-40;1!UBERON:0004872;6.04e-07;7 | |ontology_enrichment_development_v019=UBERON:0003124;2.21e-40;1!UBERON:0004872;6.04e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!7.04e-35!3;UBERON:0000920!7.04e-35!3;UBERON:0003124!2.41e-26!7;UBERON:0005631!2.77e-20!14;UBERON:0000158!2.77e-20!14;UBERON:0001301!3.08e-12!1;UBERON:0000478!8.27e-12!24 | |ontology_enrichment_uberon=UBERON:0000476!7.04e-35!3;UBERON:0000920!7.04e-35!3;UBERON:0003124!2.41e-26!7;UBERON:0005631!2.77e-20!14;UBERON:0000158!2.77e-20!14;UBERON:0001301!3.08e-12!1;UBERON:0000478!8.27e-12!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.33e-118;3!UBERON:0000920;2.33e-118;3!UBERON:0005631;2.16e-63;10!UBERON:0000158;2.16e-63;10!UBERON:0000478;1.51e-41;24!UBERON:0001987;3.42e-11;4!UBERON:0000305;6.39e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0003124;2.33e-118;3!UBERON:0000920;2.33e-118;3!UBERON:0005631;2.16e-63;10!UBERON:0000158;2.16e-63;10!UBERON:0000478;1.51e-41;24!UBERON:0001987;3.42e-11;4!UBERON:0000305;6.39e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.33e-118,3;UBERON:0003124,3.52e-90,7;UBERON:0005631,1.65e-70,14;UBERON:0000158,1.65e-70,14;UBERON:0000478,1.51e-41,24;UBERON:0004923,1.27e-15,66;UBERON:0001987,3.42e-11,4;UBERON:0004340,3.42e-11,4;UBERON:0000305,6.39e-07,7 | |||
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|short_description=p10@ABP1 | |short_description=p10@ABP1 | ||
}} | }} |
Latest revision as of 04:18, 17 September 2015
Short description: | p10@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -18bp_to_CU680774, JF432306_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.33e-118 | 3 |
extraembryonic cell | 7.67e-34 | 19 |
amnion mesenchymal stem cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.33e-118 | 3 |
chorion | 3.52e-90 | 7 |
extraembryonic membrane | 1.65e-70 | 14 |
membranous layer | 1.65e-70 | 14 |
extraembryonic structure | 1.51e-41 | 24 |
organ component layer | 1.27e-15 | 66 |
placenta | 3.42e-11 | 4 |
allantois | 3.42e-11 | 4 |
amnion | 6.39e-07 | 7 |