FFCP PHASE1:Hg19::chr5:152870189..152870200,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2890 | |EntrezGene=2890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4571 | |HGNC=4571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000474198_5end | |association_with_transcript=-3bp_to_ENST00000474198_5end | ||
|cluster_id=chr5:152870189..152870200,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_5_at_GRIA1_5end | |description=CAGE_peak_5_at_GRIA1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.48e-09;2 | |ontology_enrichment_celltype_v019=CL:0000047;2.48e-09;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.37e-13;3!UBERON:0006601;1.18e-12;82!UBERON:0010122;3.46e-09;2 | |ontology_enrichment_development_v019=UBERON:0006215;2.37e-13;3!UBERON:0006601;1.18e-12;82!UBERON:0010122;3.46e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-69!57;UBERON:0005068!3.00e-69!57;UBERON:0006241!3.00e-69!57;UBERON:0007135!3.00e-69!57;UBERON:0001017!8.69e-68!82;UBERON:0005743!3.68e-66!86;UBERON:0000073!2.87e-62!94;UBERON:0001016!2.87e-62!94;UBERON:0002616!4.33e-58!59;UBERON:0002780!6.07e-57!41;UBERON:0001890!6.07e-57!41;UBERON:0006240!6.07e-57!41;UBERON:0000955!1.74e-56!69;UBERON:0006238!1.74e-56!69;UBERON:0001893!3.03e-56!34;UBERON:0002020!3.61e-56!34;UBERON:0003528!3.61e-56!34;UBERON:0003080!2.64e-55!42;UBERON:0002791!1.51e-54!33;UBERON:0001869!1.14e-53!32;UBERON:0003075!1.62e-52!86;UBERON:0007284!1.62e-52!86;UBERON:0002346!2.11e-49!90;UBERON:0003056!7.81e-43!61;UBERON:0000956!4.49e-42!25;UBERON:0000203!4.49e-42!25;UBERON:0002619!1.47e-37!22;UBERON:0004121!2.75e-37!169;UBERON:0000033!3.44e-37!123;UBERON:0007023!4.10e-37!115;UBERON:0000924!6.07e-36!173;UBERON:0006601!6.07e-36!173;UBERON:0000153!1.27e-34!129;UBERON:0007811!1.27e-34!129;UBERON:0001950!7.07e-34!20;UBERON:0000475!2.48e-16!365;UBERON:0002420!5.88e-16!9;UBERON:0007245!5.88e-16!9;UBERON:0010009!5.88e-16!9;UBERON:0010011!5.88e-16!9;UBERON:0000454!5.88e-16!9;UBERON:0002308!3.14e-15!9;UBERON:0000125!3.14e-15!9;UBERON:0003076!1.19e-14!15;UBERON:0003057!1.19e-14!15;UBERON:0000025!7.55e-14!194;UBERON:0009663!2.84e-12!7;UBERON:0001871!4.53e-12!7;UBERON:0000200!6.41e-12!6;UBERON:0000349!9.22e-11!5;UBERON:0004733!9.22e-11!12;UBERON:0002028!9.22e-11!12;UBERON:0007277!9.22e-11!12;UBERON:0000483!1.62e-10!309;UBERON:0000119!3.04e-10!312;UBERON:0001872!5.01e-10!5;UBERON:0004111!7.09e-10!241;UBERON:0004732!8.96e-10!13;UBERON:0002021!9.27e-10!5;UBERON:0002680!3.66e-09!9;UBERON:0001895!3.66e-09!9;UBERON:0010092!3.66e-09!9;UBERON:0000477!2.21e-08!286;UBERON:0000369!2.24e-08!4;UBERON:0002435!2.24e-08!4;UBERON:0000204!2.24e-08!4;UBERON:0010082!2.24e-08!4;UBERON:0000468!2.95e-08!659;UBERON:0000467!3.04e-08!625;UBERON:0000480!3.46e-08!626;UBERON:0000064!1.06e-07!219;UBERON:0002298!2.75e-07!8;UBERON:0000062!4.87e-07!511;UBERON:0002771!7.32e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!3.00e-69!57;UBERON:0005068!3.00e-69!57;UBERON:0006241!3.00e-69!57;UBERON:0007135!3.00e-69!57;UBERON:0001017!8.69e-68!82;UBERON:0005743!3.68e-66!86;UBERON:0000073!2.87e-62!94;UBERON:0001016!2.87e-62!94;UBERON:0002616!4.33e-58!59;UBERON:0002780!6.07e-57!41;UBERON:0001890!6.07e-57!41;UBERON:0006240!6.07e-57!41;UBERON:0000955!1.74e-56!69;UBERON:0006238!1.74e-56!69;UBERON:0001893!3.03e-56!34;UBERON:0002020!3.61e-56!34;UBERON:0003528!3.61e-56!34;UBERON:0003080!2.64e-55!42;UBERON:0002791!1.51e-54!33;UBERON:0001869!1.14e-53!32;UBERON:0003075!1.62e-52!86;UBERON:0007284!1.62e-52!86;UBERON:0002346!2.11e-49!90;UBERON:0003056!7.81e-43!61;UBERON:0000956!4.49e-42!25;UBERON:0000203!4.49e-42!25;UBERON:0002619!1.47e-37!22;UBERON:0004121!2.75e-37!169;UBERON:0000033!3.44e-37!123;UBERON:0007023!4.10e-37!115;UBERON:0000924!6.07e-36!173;UBERON:0006601!6.07e-36!173;UBERON:0000153!1.27e-34!129;UBERON:0007811!1.27e-34!129;UBERON:0001950!7.07e-34!20;UBERON:0000475!2.48e-16!365;UBERON:0002420!5.88e-16!9;UBERON:0007245!5.88e-16!9;UBERON:0010009!5.88e-16!9;UBERON:0010011!5.88e-16!9;UBERON:0000454!5.88e-16!9;UBERON:0002308!3.14e-15!9;UBERON:0000125!3.14e-15!9;UBERON:0003076!1.19e-14!15;UBERON:0003057!1.19e-14!15;UBERON:0000025!7.55e-14!194;UBERON:0009663!2.84e-12!7;UBERON:0001871!4.53e-12!7;UBERON:0000200!6.41e-12!6;UBERON:0000349!9.22e-11!5;UBERON:0004733!9.22e-11!12;UBERON:0002028!9.22e-11!12;UBERON:0007277!9.22e-11!12;UBERON:0000483!1.62e-10!309;UBERON:0000119!3.04e-10!312;UBERON:0001872!5.01e-10!5;UBERON:0004111!7.09e-10!241;UBERON:0004732!8.96e-10!13;UBERON:0002021!9.27e-10!5;UBERON:0002680!3.66e-09!9;UBERON:0001895!3.66e-09!9;UBERON:0010092!3.66e-09!9;UBERON:0000477!2.21e-08!286;UBERON:0000369!2.24e-08!4;UBERON:0002435!2.24e-08!4;UBERON:0000204!2.24e-08!4;UBERON:0010082!2.24e-08!4;UBERON:0000468!2.95e-08!659;UBERON:0000467!3.04e-08!625;UBERON:0000480!3.46e-08!626;UBERON:0000064!1.06e-07!219;UBERON:0002298!2.75e-07!8;UBERON:0000062!4.87e-07!511;UBERON:0002771!7.32e-07!3 | ||
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|short_description=p5@GRIA1 | |short_description=p5@GRIA1 | ||
}} | }} |
Latest revision as of 11:26, 16 September 2015
Short description: | p5@GRIA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GRIA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -3bp_to_ENST00000474198_5end |
EntrezGene: | GRIA1 |
HGNC: | 4571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data