FFCP PHASE1:Hg19::chr11:70963976..70963985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFP8 | |UniProt=C9JFP8 | ||
|association_with_transcript=-353bp_to_ENST00000413503_5end | |association_with_transcript=-353bp_to_ENST00000413503_5end | ||
|cluster_id=chr11:70963976..70963985,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_29_at_SHANK2_5end | |description=CAGE_peak_29_at_SHANK2_5end | ||
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|ontology_enrichment_celltype=CL:0000181!7.84e-13!12;CL:0000417!7.84e-13!12;CL:0000668!7.84e-13!12;CL:0000414!7.84e-13!12;CL:0000412!7.84e-13!12;CL:0000182!7.84e-13!12;CL:0002563!3.62e-10!4;CL:0000223!5.06e-07!59 | |ontology_enrichment_celltype=CL:0000181!7.84e-13!12;CL:0000417!7.84e-13!12;CL:0000668!7.84e-13!12;CL:0000414!7.84e-13!12;CL:0000412!7.84e-13!12;CL:0000182!7.84e-13!12;CL:0002563!3.62e-10!4;CL:0000223!5.06e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.27e-53;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.27e-53;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.27e-53,12;CL:0000223,1.28e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.55e-57;11!UBERON:0009497;7.59e-49;13!UBERON:0001041;1.09e-21;30!UBERON:0003104;8.75e-21;31!CL:0000223;9.77e-09;58 | |ontology_enrichment_development_v019=UBERON:0004161;1.55e-57;11!UBERON:0009497;7.59e-49;13!UBERON:0001041;1.09e-21;30!UBERON:0003104;8.75e-21;31!CL:0000223;9.77e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;2.27e-10;39 | |ontology_enrichment_disease_v019=DOID:7;2.27e-10;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,6.08e-10,39 | |||
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|short_description=p29@SHANK2 | |short_description=p29@SHANK2 | ||
}} | }} |
Latest revision as of 23:36, 19 September 2015
Short description: | p29@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_SHANK2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -353bp_to_ENST00000413503_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | C9JFP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.27e-53 | 12 |
endodermal cell | 1.28e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 6.08e-10 | 39 |