FFCP PHASE1:Hg19::chr13:24144896..24144956,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55504 | |EntrezGene=55504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11915 | |HGNC=11915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS68 | |UniProt=Q9NS68 | ||
|association_with_transcript=93bp_to_ENST00000403372_5end | |association_with_transcript=93bp_to_ENST00000403372_5end | ||
|cluster_id=chr13:24144896..24144956,+ | |||
|coexpression_cluster_id=C221 | |coexpression_cluster_id=C221 | ||
|description=CAGE_peak_3_at_TNFRSF19_5end | |description=CAGE_peak_3_at_TNFRSF19_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.20e-18;2!CL:0000182;3.08e-12;12!CL:0002563;8.63e-10;4 | |ontology_enrichment_celltype_v019=CL:0002253;1.20e-18;2!CL:0000182;3.08e-12;12!CL:0002563;8.63e-10;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.20e-18,2;CL:0000182,3.00e-12,12;CL:0002563,8.63e-10,4;CL:0000223,8.31e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.47e-13;11!UBERON:0009497;2.61e-11;13!UBERON:0001041;2.43e-10;30!UBERON:0003104;5.49e-10;31!UBERON:0006298;8.24e-10;1!UBERON:0008801;8.24e-10;1!UBERON:0006595;2.70e-08;86 | |ontology_enrichment_development_v019=UBERON:0004161;2.47e-13;11!UBERON:0009497;2.61e-11;13!UBERON:0001041;2.43e-10;30!UBERON:0003104;5.49e-10;31!UBERON:0006298;8.24e-10;1!UBERON:0008801;8.24e-10;1!UBERON:0006595;2.70e-08;86 | ||
|ontology_enrichment_disease=DOID:5409!5.36e-08!4;DOID:3905!1.46e-07!9;DOID:1325!5.12e-07!7;DOID:3904!5.12e-07!7;DOID:0050615!6.02e-07!16 | |ontology_enrichment_disease=DOID:5409!5.36e-08!4;DOID:3905!1.46e-07!9;DOID:1325!5.12e-07!7;DOID:3904!5.12e-07!7;DOID:0050615!6.02e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:3119;2.19e-10;14!DOID:0050619;3.55e-10;1!DOID:1357;3.55e-10;1 | |ontology_enrichment_disease_v019=DOID:3119;2.19e-10;14!DOID:0050619;3.55e-10;1!DOID:1357;3.55e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,2.25e-10,14;DOID:0050619,3.40e-10,1;DOID:1357,3.40e-10,1;DOID:0050687,6.83e-07,143;DOID:305,7.96e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001041!4.79e-09!98;UBERON:0004921!4.86e-09!129;UBERON:0004185!4.86e-09!129;UBERON:0000077!6.37e-09!130;UBERON:0001004!2.48e-07!72;UBERON:0006947!7.70e-07!3;UBERON:0004054!7.70e-07!3 | |ontology_enrichment_uberon=UBERON:0001041!4.79e-09!98;UBERON:0004921!4.86e-09!129;UBERON:0004185!4.86e-09!129;UBERON:0000077!6.37e-09!130;UBERON:0001004!2.48e-07!72;UBERON:0006947!7.70e-07!3;UBERON:0004054!7.70e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.92e-18;2!UBERON:0001044;2.11e-13;6!UBERON:0003293;2.11e-13;6!UBERON:0003294;2.11e-13;6!UBERON:0010047;2.11e-13;6!UBERON:0003408;2.11e-13;6!UBERON:0000167;2.11e-13;6!UBERON:0002365;1.42e-12;31!UBERON:0002330;1.42e-12;31!UBERON:0001764;3.55e-10;1!UBERON:0001825;3.55e-10;1!UBERON:0001041;4.48e-10;14!UBERON:0007029;8.24e-10;1!UBERON:0001831;8.24e-10;1!UBERON:0001736;8.24e-10;1!UBERON:0001567;8.24e-10;1!UBERON:0001052;8.63e-10;4!UBERON:0001242;8.63e-10;4!UBERON:0001262;8.63e-10;4!UBERON:0004786;8.63e-10;4!UBERON:0004808;8.63e-10;4!UBERON:0001277;8.63e-10;4!UBERON:0004921;2.55e-08;33!UBERON:0004907;5.30e-08;5!UBERON:0002107;8.86e-08;19!UBERON:0006925;8.86e-08;19 | |ontology_enrichment_uberon_v019=UBERON:0001829;6.92e-18;2!UBERON:0001044;2.11e-13;6!UBERON:0003293;2.11e-13;6!UBERON:0003294;2.11e-13;6!UBERON:0010047;2.11e-13;6!UBERON:0003408;2.11e-13;6!UBERON:0000167;2.11e-13;6!UBERON:0002365;1.42e-12;31!UBERON:0002330;1.42e-12;31!UBERON:0001764;3.55e-10;1!UBERON:0001825;3.55e-10;1!UBERON:0001041;4.48e-10;14!UBERON:0007029;8.24e-10;1!UBERON:0001831;8.24e-10;1!UBERON:0001736;8.24e-10;1!UBERON:0001567;8.24e-10;1!UBERON:0001052;8.63e-10;4!UBERON:0001242;8.63e-10;4!UBERON:0001262;8.63e-10;4!UBERON:0004786;8.63e-10;4!UBERON:0004808;8.63e-10;4!UBERON:0001277;8.63e-10;4!UBERON:0004921;2.55e-08;33!UBERON:0004907;5.30e-08;5!UBERON:0002107;8.86e-08;19!UBERON:0006925;8.86e-08;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.35e-18,2;UBERON:0004921,6.03e-14,118;UBERON:0001044,2.06e-13,6;UBERON:0003293,2.06e-13,6;UBERON:0003294,2.06e-13,6;UBERON:0010047,2.06e-13,6;UBERON:0000167,2.06e-13,6;UBERON:0002365,3.53e-13,31;UBERON:0002330,3.53e-13,31;UBERON:0001041,1.82e-12,87;UBERON:0001007,6.91e-11,145;UBERON:0001555,6.91e-11,145;UBERON:0007026,6.91e-11,145;UBERON:0001764,3.40e-10,1;UBERON:0001825,3.40e-10,1;UBERON:0001831,6.91e-10,1;UBERON:0001567,6.91e-10,1;UBERON:0008801,6.91e-10,1;UBERON:0007029,8.24e-10,1;UBERON:0001052,8.63e-10,4;UBERON:0001242,8.63e-10,4;UBERON:0001262,8.63e-10,4;UBERON:0004786,8.63e-10,4;UBERON:0004808,8.63e-10,4;UBERON:0001277,8.63e-10,4;UBERON:0001736,8.99e-10,1;UBERON:0006298,8.99e-10,1;UBERON:0004119,1.25e-09,160;UBERON:0000925,1.25e-09,160;UBERON:0006595,1.25e-09,160;UBERON:0007499,6.68e-09,25;UBERON:0009856,1.50e-08,26;UBERON:0002530,1.71e-08,59;UBERON:0003408,2.94e-08,10;UBERON:0004907,5.31e-08,5;UBERON:0002107,8.70e-08,19;UBERON:0006925,8.70e-08,19;UBERON:0008836,8.70e-08,19;UBERON:0005911,1.73e-07,82;UBERON:0003929,2.57e-07,54;UBERON:0008835,9.74e-07,22;UBERON:0003894,9.74e-07,22 | |||
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|short_description=p3@TNFRSF19 | |short_description=p3@TNFRSF19 | ||
}} | }} |
Latest revision as of 20:56, 16 September 2015
Short description: | p3@TNFRSF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFRSF19_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | 93bp_to_ENST00000403372_5end |
EntrezGene: | TNFRSF19 |
HGNC: | 11915 |
UniProt: | Q9NS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.20e-18 | 2 |
hepatocyte | 3.00e-12 | 12 |
intestinal epithelial cell | 8.63e-10 | 4 |
endodermal cell | 8.31e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.25e-10 | 14 |
paranasal sinus cancer | 3.40e-10 | 1 |
maxillary sinus cancer | 3.40e-10 | 1 |
cell type cancer | 6.83e-07 | 143 |
carcinoma | 7.96e-07 | 106 |