FFCP PHASE1:Hg19::chr2:173686542..173686585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11069 | |EntrezGene=11069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16626 | |HGNC=16626 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WZA2 | |UniProt=Q8WZA2 | ||
|association_with_transcript=227bp_to_NM_001100397,uc002uhw.3_5end | |association_with_transcript=227bp_to_NM_001100397,uc002uhw.3_5end | ||
|cluster_id=chr2:173686542..173686585,+ | |||
|coexpression_cluster_id=C2670 | |coexpression_cluster_id=C2670 | ||
|description=CAGE_peak_5_at_RAPGEF4_5end | |description=CAGE_peak_5_at_RAPGEF4_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.36e-17!24;CL:0000115!2.27e-12!35;CL:0000071!9.72e-12!18;CL:0002546!9.72e-12!18;CL:0002078!2.65e-09!44;CL:0005020!1.00e-07!6;CL:0002138!1.00e-07!6;CL:0005022!1.00e-07!6;CL:0002543!1.08e-07!6;CL:1000413!3.58e-07!9 | |ontology_enrichment_celltype=CL:0002139!1.36e-17!24;CL:0000115!2.27e-12!35;CL:0000071!9.72e-12!18;CL:0002546!9.72e-12!18;CL:0002078!2.65e-09!44;CL:0005020!1.00e-07!6;CL:0002138!1.00e-07!6;CL:0005022!1.00e-07!6;CL:0002543!1.08e-07!6;CL:1000413!3.58e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.17e-14;24!CL:0000115;1.24e-10;36!CL:0002543;7.19e-10;6!CL:0000071;7.74e-09;18!CL:0002138;9.22e-08;6 | |ontology_enrichment_celltype_v019=CL:0002139;2.17e-14;24!CL:0000115;1.24e-10;36!CL:0002543;7.19e-10;6!CL:0000071;7.74e-09;18!CL:0002138;9.22e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.62e-14,24;CL:0000115,7.49e-12,36;CL:0002543,5.54e-10,6;CL:0000071,4.97e-09,18;CL:0002546,4.97e-09,18;CL:0002078,1.66e-08,45;CL:0005020,1.23e-07,6;CL:0002138,1.23e-07,6;CL:0005022,1.23e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.74e-09;18!UBERON:0006601;5.78e-08;82!CL:0005022;9.22e-08;6 | |ontology_enrichment_development_v019=CL:0002546;7.74e-09;18!UBERON:0006601;5.78e-08;82!CL:0005022;9.22e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.99e-76!115;UBERON:0001049!6.60e-34!57;UBERON:0005068!6.60e-34!57;UBERON:0006241!6.60e-34!57;UBERON:0007135!6.60e-34!57;UBERON:0004111!4.68e-28!241;UBERON:0002616!1.56e-27!59;UBERON:0003080!9.32e-27!42;UBERON:0002780!4.67e-26!41;UBERON:0001890!4.67e-26!41;UBERON:0006240!4.67e-26!41;UBERON:0003075!4.08e-25!86;UBERON:0007284!4.08e-25!86;UBERON:0002020!2.54e-24!34;UBERON:0003528!2.54e-24!34;UBERON:0000477!3.31e-24!286;UBERON:0001893!1.28e-23!34;UBERON:0000025!1.37e-23!194;UBERON:0002346!3.03e-23!90;UBERON:0001017!4.44e-23!82;UBERON:0002791!9.04e-23!33;UBERON:0005743!1.16e-22!86;UBERON:0000955!3.09e-22!69;UBERON:0006238!3.09e-22!69;UBERON:0001869!5.70e-22!32;UBERON:0000073!3.95e-21!94;UBERON:0001016!3.95e-21!94;UBERON:0002619!2.36e-17!22;UBERON:0003056!2.64e-16!61;UBERON:0000956!5.53e-16!25;UBERON:0000203!5.53e-16!25;UBERON:0001950!2.83e-15!20;UBERON:0000153!2.10e-13!129;UBERON:0007811!2.10e-13!129;UBERON:0000483!1.13e-12!309;UBERON:0000119!2.65e-12!312;UBERON:0000033!8.52e-12!123;UBERON:0001986!9.72e-12!18;UBERON:0004638!9.72e-12!18;UBERON:0004852!9.72e-12!18;UBERON:0004121!4.52e-11!169;UBERON:0000924!1.94e-10!173;UBERON:0006601!1.94e-10!173;UBERON:0002308!3.96e-10!9;UBERON:0000125!3.96e-10!9;UBERON:0002298!5.97e-10!8;UBERON:0000487!7.85e-09!22;UBERON:0003076!2.75e-08!15;UBERON:0003057!2.75e-08!15;UBERON:0000480!3.49e-08!626;UBERON:0000467!8.29e-08!625;UBERON:0009663!1.02e-07!7;UBERON:0002420!2.10e-07!9;UBERON:0007245!2.10e-07!9;UBERON:0010009!2.10e-07!9;UBERON:0010011!2.10e-07!9;UBERON:0000454!2.10e-07!9;UBERON:0000468!2.48e-07!659;UBERON:0006914!2.72e-07!25;UBERON:0000200!2.93e-07!6;UBERON:0002465!3.51e-07!10;UBERON:0003915!3.58e-07!9;UBERON:0004700!3.58e-07!9;UBERON:0001917!3.58e-07!9;UBERON:0000055!5.09e-07!69;UBERON:0004732!5.17e-07!13;UBERON:0003103!5.38e-07!69;UBERON:0001871!9.17e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.99e-76!115;UBERON:0001049!6.60e-34!57;UBERON:0005068!6.60e-34!57;UBERON:0006241!6.60e-34!57;UBERON:0007135!6.60e-34!57;UBERON:0004111!4.68e-28!241;UBERON:0002616!1.56e-27!59;UBERON:0003080!9.32e-27!42;UBERON:0002780!4.67e-26!41;UBERON:0001890!4.67e-26!41;UBERON:0006240!4.67e-26!41;UBERON:0003075!4.08e-25!86;UBERON:0007284!4.08e-25!86;UBERON:0002020!2.54e-24!34;UBERON:0003528!2.54e-24!34;UBERON:0000477!3.31e-24!286;UBERON:0001893!1.28e-23!34;UBERON:0000025!1.37e-23!194;UBERON:0002346!3.03e-23!90;UBERON:0001017!4.44e-23!82;UBERON:0002791!9.04e-23!33;UBERON:0005743!1.16e-22!86;UBERON:0000955!3.09e-22!69;UBERON:0006238!3.09e-22!69;UBERON:0001869!5.70e-22!32;UBERON:0000073!3.95e-21!94;UBERON:0001016!3.95e-21!94;UBERON:0002619!2.36e-17!22;UBERON:0003056!2.64e-16!61;UBERON:0000956!5.53e-16!25;UBERON:0000203!5.53e-16!25;UBERON:0001950!2.83e-15!20;UBERON:0000153!2.10e-13!129;UBERON:0007811!2.10e-13!129;UBERON:0000483!1.13e-12!309;UBERON:0000119!2.65e-12!312;UBERON:0000033!8.52e-12!123;UBERON:0001986!9.72e-12!18;UBERON:0004638!9.72e-12!18;UBERON:0004852!9.72e-12!18;UBERON:0004121!4.52e-11!169;UBERON:0000924!1.94e-10!173;UBERON:0006601!1.94e-10!173;UBERON:0002308!3.96e-10!9;UBERON:0000125!3.96e-10!9;UBERON:0002298!5.97e-10!8;UBERON:0000487!7.85e-09!22;UBERON:0003076!2.75e-08!15;UBERON:0003057!2.75e-08!15;UBERON:0000480!3.49e-08!626;UBERON:0000467!8.29e-08!625;UBERON:0009663!1.02e-07!7;UBERON:0002420!2.10e-07!9;UBERON:0007245!2.10e-07!9;UBERON:0010009!2.10e-07!9;UBERON:0010011!2.10e-07!9;UBERON:0000454!2.10e-07!9;UBERON:0000468!2.48e-07!659;UBERON:0006914!2.72e-07!25;UBERON:0000200!2.93e-07!6;UBERON:0002465!3.51e-07!10;UBERON:0003915!3.58e-07!9;UBERON:0004700!3.58e-07!9;UBERON:0001917!3.58e-07!9;UBERON:0000055!5.09e-07!69;UBERON:0004732!5.17e-07!13;UBERON:0003103!5.38e-07!69;UBERON:0001871!9.17e-07!7 | ||
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|short_description=p5@RAPGEF4 | |short_description=p5@RAPGEF4 | ||
}} | }} |
Latest revision as of 05:42, 18 September 2015
Short description: | p5@RAPGEF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAPGEF4_5end |
Coexpression cluster: | C2670_uterus_lung_cervix_adipose_penis_ductus_seminal |
Association with transcript: | 227bp_to_NM_001100397, uc002uhw.3_5end |
EntrezGene: | RAPGEF4 |
HGNC: | 16626 |
UniProt: | Q8WZA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.62e-14 | 24 |
endothelial cell | 7.49e-12 | 36 |
vein endothelial cell | 5.54e-10 | 6 |
blood vessel endothelial cell | 4.97e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.97e-09 | 18 |
meso-epithelial cell | 1.66e-08 | 45 |
lymphangioblast | 1.23e-07 | 6 |
endothelial cell of lymphatic vessel | 1.23e-07 | 6 |
vascular lymphangioblast | 1.23e-07 | 6 |