FFCP PHASE1:Hg19::chr19:40440535..40440541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8857 | |EntrezGene=8857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13572 | |HGNC=13572 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6R7 | |UniProt=Q9Y6R7 | ||
|association_with_transcript=-2bp_to_ENST00000221347,NM_003890,uc002omp.3_5end | |association_with_transcript=-2bp_to_ENST00000221347,NM_003890,uc002omp.3_5end | ||
|cluster_id=chr19:40440535..40440541,- | |||
|coexpression_cluster_id=C3789 | |coexpression_cluster_id=C3789 | ||
|description=CAGE_peak_1_at_FCGBP_5end | |description=CAGE_peak_1_at_FCGBP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!8.12e-14!5;CL:0000990!1.79e-07!8;CL:0001014!4.63e-07!2;CL:0001016!4.63e-07!2 | |ontology_enrichment_celltype=CL:0000453!8.12e-14!5;CL:0000990!1.79e-07!8;CL:0001014!4.63e-07!2;CL:0001016!4.63e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.20e-22;2!CL:0001016;1.20e-22;2!CL:0000453;1.25e-09;5!CL:0000840;3.64e-08;5 | |ontology_enrichment_celltype_v019=CL:0001014;1.20e-22;2!CL:0001016;1.20e-22;2!CL:0000453;1.25e-09;5!CL:0000840;3.64e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.20e-22,2;CL:0001016,1.20e-22,2;CL:0000453,1.25e-09,5;CL:0000840,3.64e-08,5;CL:0001029,3.64e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.63e-12;1!UBERON:0001045;8.64e-12;1!UBERON:0010115;1.07e-11;1 | |ontology_enrichment_development_v019=UBERON:0006242;2.63e-12;1!UBERON:0001045;8.64e-12;1!UBERON:0010115;1.07e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.64e-55!115;UBERON:0001049!1.85e-18!57;UBERON:0005068!1.85e-18!57;UBERON:0006241!1.85e-18!57;UBERON:0007135!1.85e-18!57;UBERON:0003080!5.94e-16!42;UBERON:0002780!1.96e-14!41;UBERON:0001890!1.96e-14!41;UBERON:0006240!1.96e-14!41;UBERON:0002616!2.26e-14!59;UBERON:0001893!4.03e-14!34;UBERON:0003075!8.29e-14!86;UBERON:0007284!8.29e-14!86;UBERON:0005743!1.41e-13!86;UBERON:0001017!2.43e-13!82;UBERON:0002346!6.75e-13!90;UBERON:0002791!7.95e-13!33;UBERON:0000955!1.33e-12!69;UBERON:0006238!1.33e-12!69;UBERON:0002020!1.45e-12!34;UBERON:0003528!1.45e-12!34;UBERON:0000073!1.11e-11!94;UBERON:0001016!1.11e-11!94;UBERON:0001869!2.05e-11!32;UBERON:0000153!3.59e-11!129;UBERON:0007811!3.59e-11!129;UBERON:0003056!8.64e-11!61;UBERON:0000033!3.40e-09!123;UBERON:0002619!7.37e-09!22;UBERON:0006947!1.70e-08!3;UBERON:0004054!1.70e-08!3;UBERON:0002298!3.06e-08!8;UBERON:0001950!4.85e-08!20;UBERON:0000956!1.31e-07!25;UBERON:0000203!1.31e-07!25;UBERON:0005409!4.90e-07!35;UBERON:0002308!4.90e-07!9;UBERON:0000125!4.90e-07!9;UBERON:0002420!5.10e-07!9;UBERON:0007245!5.10e-07!9;UBERON:0010009!5.10e-07!9;UBERON:0010011!5.10e-07!9;UBERON:0000454!5.10e-07!9;UBERON:0003127!6.31e-07!2;UBERON:0004121!9.95e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!5.64e-55!115;UBERON:0001049!1.85e-18!57;UBERON:0005068!1.85e-18!57;UBERON:0006241!1.85e-18!57;UBERON:0007135!1.85e-18!57;UBERON:0003080!5.94e-16!42;UBERON:0002780!1.96e-14!41;UBERON:0001890!1.96e-14!41;UBERON:0006240!1.96e-14!41;UBERON:0002616!2.26e-14!59;UBERON:0001893!4.03e-14!34;UBERON:0003075!8.29e-14!86;UBERON:0007284!8.29e-14!86;UBERON:0005743!1.41e-13!86;UBERON:0001017!2.43e-13!82;UBERON:0002346!6.75e-13!90;UBERON:0002791!7.95e-13!33;UBERON:0000955!1.33e-12!69;UBERON:0006238!1.33e-12!69;UBERON:0002020!1.45e-12!34;UBERON:0003528!1.45e-12!34;UBERON:0000073!1.11e-11!94;UBERON:0001016!1.11e-11!94;UBERON:0001869!2.05e-11!32;UBERON:0000153!3.59e-11!129;UBERON:0007811!3.59e-11!129;UBERON:0003056!8.64e-11!61;UBERON:0000033!3.40e-09!123;UBERON:0002619!7.37e-09!22;UBERON:0006947!1.70e-08!3;UBERON:0004054!1.70e-08!3;UBERON:0002298!3.06e-08!8;UBERON:0001950!4.85e-08!20;UBERON:0000956!1.31e-07!25;UBERON:0000203!1.31e-07!25;UBERON:0005409!4.90e-07!35;UBERON:0002308!4.90e-07!9;UBERON:0000125!4.90e-07!9;UBERON:0002420!5.10e-07!9;UBERON:0007245!5.10e-07!9;UBERON:0010009!5.10e-07!9;UBERON:0010011!5.10e-07!9;UBERON:0000454!5.10e-07!9;UBERON:0003127!6.31e-07!2;UBERON:0004121!9.95e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.27e-28;22!UBERON:0000160;4.33e-28;17!UBERON:0003127;4.14e-22;2!UBERON:0002108;1.12e-19;4!UBERON:0001155;4.62e-19;9!UBERON:0004921;3.25e-17;33!UBERON:0000059;1.20e-15;11!UBERON:0001154;8.64e-12;1!UBERON:0001153;8.64e-12;1!UBERON:0009854;8.64e-12;1!UBERON:0002363;1.07e-11;1!UBERON:0001555;1.56e-07;54!UBERON:0003126;5.76e-07;7!UBERON:0001005;5.76e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0005409;2.27e-28;22!UBERON:0000160;4.33e-28;17!UBERON:0003127;4.14e-22;2!UBERON:0002108;1.12e-19;4!UBERON:0001155;4.62e-19;9!UBERON:0004921;3.25e-17;33!UBERON:0000059;1.20e-15;11!UBERON:0001154;8.64e-12;1!UBERON:0001153;8.64e-12;1!UBERON:0009854;8.64e-12;1!UBERON:0002363;1.07e-11;1!UBERON:0001555;1.56e-07;54!UBERON:0003126;5.76e-07;7!UBERON:0001005;5.76e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.07e-28,17;UBERON:0005409,5.03e-25,25;UBERON:0003127,3.93e-22,2;UBERON:0002108,1.09e-19,4;UBERON:0001155,4.41e-19,9;UBERON:0000059,1.15e-15,11;UBERON:0001154,8.64e-12,1;UBERON:0001153,8.64e-12,1;UBERON:0001045,8.64e-12,1;UBERON:0002363,1.19e-11,1;UBERON:0007645,1.19e-11,1;UBERON:0007647,1.19e-11,1;UBERON:0010115,1.19e-11,1;UBERON:0007023,1.72e-09,114;UBERON:0004921,1.76e-07,118;UBERON:0001007,3.56e-07,145;UBERON:0001555,3.56e-07,145;UBERON:0007026,3.56e-07,145;UBERON:0003126,5.67e-07,7;UBERON:0001005,5.67e-07,7 | |||
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| ||
|short_description=p1@FCGBP | |short_description=p1@FCGBP | ||
}} | }} |
Latest revision as of 00:41, 18 September 2015
Short description: | p1@FCGBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FCGBP_5end |
Coexpression cluster: | C3789_gall_immature_colon_small_trachea_duodenum_temporal |
Association with transcript: | -2bp_to_ENST00000221347, NM_003890, uc002omp.3_5end |
EntrezGene: | FCGBP |
HGNC: | 13572 |
UniProt: | Q9Y6R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.20e-22 | 2 |
immature CD1a-positive Langerhans cell | 1.20e-22 | 2 |
Langerhans cell | 1.25e-09 | 5 |
immature conventional dendritic cell | 3.64e-08 | 5 |
common dendritic progenitor | 3.64e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.07e-28 | 17 |
gastrointestinal system | 5.03e-25 | 25 |
open tracheal system trachea | 3.93e-22 | 2 |
small intestine | 1.09e-19 | 4 |
colon | 4.41e-19 | 9 |
large intestine | 1.15e-15 | 11 |
vermiform appendix | 8.64e-12 | 1 |
caecum | 8.64e-12 | 1 |
midgut | 8.64e-12 | 1 |
dura mater | 1.19e-11 | 1 |
future meninx | 1.19e-11 | 1 |
ectomeninx | 1.19e-11 | 1 |
future dura mater | 1.19e-11 | 1 |
adult organism | 1.72e-09 | 114 |
subdivision of digestive tract | 1.76e-07 | 118 |
digestive system | 3.56e-07 | 145 |
digestive tract | 3.56e-07 | 145 |
primitive gut | 3.56e-07 | 145 |
trachea | 5.67e-07 | 7 |
respiratory airway | 5.67e-07 | 7 |