FFCP PHASE1:Hg19::chr20:19870110..19870122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000488077_5end | |association_with_transcript=56bp_to_ENST00000488077_5end | ||
|cluster_id=chr20:19870110..19870122,+ | |||
|description=CAGE_peak_19_at_RIN2_5end | |description=CAGE_peak_19_at_RIN2_5end | ||
|id=chr20:19870110..19870122,+ | |id=chr20:19870110..19870122,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.79e-26!24;CL:0000115!7.92e-22!35;CL:0000071!1.03e-17!18;CL:0002546!1.03e-17!18;CL:0002078!3.05e-17!44;CL:0000213!2.43e-11!57;CL:0000215!2.43e-11!57;CL:1000413!4.38e-11!9;CL:0005020!1.94e-10!6;CL:0002138!1.94e-10!6;CL:0005022!1.94e-10!6;CL:0000222!1.39e-07!119;CL:0002544!3.65e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.79e-26!24;CL:0000115!7.92e-22!35;CL:0000071!1.03e-17!18;CL:0002546!1.03e-17!18;CL:0002078!3.05e-17!44;CL:0000213!2.43e-11!57;CL:0000215!2.43e-11!57;CL:1000413!4.38e-11!9;CL:0005020!1.94e-10!6;CL:0002138!1.94e-10!6;CL:0005022!1.94e-10!6;CL:0000222!1.39e-07!119;CL:0002544!3.65e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.99e-33;24!CL:0000115;1.68e-30;36!CL:0002138;2.71e-22;6!CL:0002078;6.88e-22;45!CL:0000071;2.65e-16;18!CL:1000413;3.98e-15;9!CL:0000213;4.48e-13;58!CL:0000215;4.48e-13;58!CL:0002544;4.58e-13;6!CL:0002144;3.77e-12;3!CL:0002188;1.23e-07;5 | |ontology_enrichment_celltype_v019=CL:0002139;4.99e-33;24!CL:0000115;1.68e-30;36!CL:0002138;2.71e-22;6!CL:0002078;6.88e-22;45!CL:0000071;2.65e-16;18!CL:1000413;3.98e-15;9!CL:0000213;4.48e-13;58!CL:0000215;4.48e-13;58!CL:0002544;4.58e-13;6!CL:0002144;3.77e-12;3!CL:0002188;1.23e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.36e-37,36;CL:0002139,4.67e-33,24;CL:0002078,4.17e-29,45;CL:0005020,2.06e-22,6;CL:0002138,2.06e-22,6;CL:0005022,2.06e-22,6;CL:0000213,4.33e-22,58;CL:0000215,4.33e-22,58;CL:0000071,2.88e-16,18;CL:0002546,2.88e-16,18;CL:1000413,5.15e-15,9;CL:0002544,6.24e-13,6;CL:0000222,6.72e-13,121;CL:0002144,3.01e-12,3;CL:0002188,1.15e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;2.71e-22;6!CL:0002546;2.65e-16;18 | |ontology_enrichment_development_v019=CL:0005022;2.71e-22;6!CL:0002546;2.65e-16;18 | ||
|ontology_enrichment_disease=DOID:2394!1.19e-07!14 | |ontology_enrichment_disease=DOID:2394!1.19e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.78e-27!69;UBERON:0002049!6.48e-23!79;UBERON:0007798!6.48e-23!79;UBERON:0001981!1.03e-21!60;UBERON:0007500!1.03e-21!60;UBERON:0004537!1.03e-21!60;UBERON:0006965!1.03e-21!60;UBERON:0004872!3.12e-20!84;UBERON:0001986!1.03e-17!18;UBERON:0004638!1.03e-17!18;UBERON:0004852!1.03e-17!18;UBERON:0001009!1.36e-17!113;UBERON:0000025!1.50e-16!194;UBERON:0004535!1.84e-16!110;UBERON:0004111!6.06e-16!241;UBERON:0007023!1.38e-14!115;UBERON:0000477!5.82e-14!286;UBERON:0000487!1.22e-13!22;UBERON:0003914!1.43e-12!118;UBERON:0006914!1.85e-11!25;UBERON:0001637!3.99e-11!42;UBERON:0003509!3.99e-11!42;UBERON:0004572!3.99e-11!42;UBERON:0003915!4.38e-11!9;UBERON:0004700!4.38e-11!9;UBERON:0001917!4.38e-11!9;UBERON:0000947!1.46e-10!21;UBERON:0010191!1.46e-10!21;UBERON:0000119!1.76e-08!312;UBERON:0002118!8.20e-08!5;UBERON:0004532!8.20e-08!5;UBERON:0000483!8.50e-08!309;UBERON:0001473!1.55e-07!8;UBERON:0004536!1.55e-07!8;UBERON:0006558!1.55e-07!8;UBERON:0002465!2.42e-07!10 | |ontology_enrichment_uberon=UBERON:0000055!7.78e-27!69;UBERON:0002049!6.48e-23!79;UBERON:0007798!6.48e-23!79;UBERON:0001981!1.03e-21!60;UBERON:0007500!1.03e-21!60;UBERON:0004537!1.03e-21!60;UBERON:0006965!1.03e-21!60;UBERON:0004872!3.12e-20!84;UBERON:0001986!1.03e-17!18;UBERON:0004638!1.03e-17!18;UBERON:0004852!1.03e-17!18;UBERON:0001009!1.36e-17!113;UBERON:0000025!1.50e-16!194;UBERON:0004535!1.84e-16!110;UBERON:0004111!6.06e-16!241;UBERON:0007023!1.38e-14!115;UBERON:0000477!5.82e-14!286;UBERON:0000487!1.22e-13!22;UBERON:0003914!1.43e-12!118;UBERON:0006914!1.85e-11!25;UBERON:0001637!3.99e-11!42;UBERON:0003509!3.99e-11!42;UBERON:0004572!3.99e-11!42;UBERON:0003915!4.38e-11!9;UBERON:0004700!4.38e-11!9;UBERON:0001917!4.38e-11!9;UBERON:0000947!1.46e-10!21;UBERON:0010191!1.46e-10!21;UBERON:0000119!1.76e-08!312;UBERON:0002118!8.20e-08!5;UBERON:0004532!8.20e-08!5;UBERON:0000483!8.50e-08!309;UBERON:0001473!1.55e-07!8;UBERON:0004536!1.55e-07!8;UBERON:0006558!1.55e-07!8;UBERON:0002465!2.42e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.63e-17;8!UBERON:0004536;8.63e-17;8!UBERON:0006558;8.63e-17;8!UBERON:0004638;2.65e-16;18!UBERON:0001986;2.65e-16;18!UBERON:0004852;2.65e-16;18!UBERON:0003915;3.98e-15;9!UBERON:0004700;3.98e-15;9!UBERON:0001917;3.98e-15;9!UBERON:0002465;1.77e-13;10!UBERON:0000487;2.93e-13;22!UBERON:0002106;2.77e-12;3!UBERON:0010523;3.77e-12;3!UBERON:0001915;3.77e-12;3!UBERON:0001982;3.77e-12;3!UBERON:0006914;1.29e-11;25!UBERON:0002405;1.12e-10;27!UBERON:0000055;5.34e-10;65!UBERON:0002134;6.04e-10;1!UBERON:0005208;6.04e-10;1!UBERON:0004145;6.04e-10;1!UBERON:0005946;6.04e-10;1!UBERON:0005965;6.04e-10;1!UBERON:0002078;6.04e-10;1!UBERON:0000947;8.41e-10;21!UBERON:0010191;8.41e-10;21!UBERON:0000490;1.32e-08;33!UBERON:0004177;1.03e-07;5!UBERON:0005057;1.03e-07;5!UBERON:0003914;1.39e-07;74!UBERON:0007500;6.52e-07;56!UBERON:0001981;6.52e-07;56!UBERON:0004537;6.52e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0001473;8.63e-17;8!UBERON:0004536;8.63e-17;8!UBERON:0006558;8.63e-17;8!UBERON:0004638;2.65e-16;18!UBERON:0001986;2.65e-16;18!UBERON:0004852;2.65e-16;18!UBERON:0003915;3.98e-15;9!UBERON:0004700;3.98e-15;9!UBERON:0001917;3.98e-15;9!UBERON:0002465;1.77e-13;10!UBERON:0000487;2.93e-13;22!UBERON:0002106;2.77e-12;3!UBERON:0010523;3.77e-12;3!UBERON:0001915;3.77e-12;3!UBERON:0001982;3.77e-12;3!UBERON:0006914;1.29e-11;25!UBERON:0002405;1.12e-10;27!UBERON:0000055;5.34e-10;65!UBERON:0002134;6.04e-10;1!UBERON:0005208;6.04e-10;1!UBERON:0004145;6.04e-10;1!UBERON:0005946;6.04e-10;1!UBERON:0005965;6.04e-10;1!UBERON:0002078;6.04e-10;1!UBERON:0000947;8.41e-10;21!UBERON:0010191;8.41e-10;21!UBERON:0000490;1.32e-08;33!UBERON:0004177;1.03e-07;5!UBERON:0005057;1.03e-07;5!UBERON:0003914;1.39e-07;74!UBERON:0007500;6.52e-07;56!UBERON:0001981;6.52e-07;56!UBERON:0004537;6.52e-07;56 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.12e-21,68;UBERON:0002049,1.38e-18,78;UBERON:0007798,1.38e-18,78;UBERON:0001473,7.03e-17,8;UBERON:0004536,7.03e-17,8;UBERON:0006558,7.03e-17,8;UBERON:0004638,2.88e-16,18;UBERON:0001986,2.88e-16,18;UBERON:0004852,2.88e-16,18;UBERON:0003915,5.15e-15,9;UBERON:0004700,5.15e-15,9;UBERON:0001917,5.15e-15,9;UBERON:0002465,1.50e-13,10;UBERON:0000487,3.13e-13,22;UBERON:0007500,1.09e-12,59;UBERON:0001981,1.09e-12,59;UBERON:0004537,1.09e-12,59;UBERON:0006965,1.09e-12,59;UBERON:0004535,1.33e-12,109;UBERON:0004872,1.59e-12,83;UBERON:0010523,3.01e-12,3;UBERON:0001915,3.01e-12,3;UBERON:0001982,3.01e-12,3;UBERON:0001009,3.36e-12,112;UBERON:0002106,3.99e-12,3;UBERON:0004854,3.99e-12,3;UBERON:0009034,3.99e-12,3;UBERON:0002095,3.99e-12,3;UBERON:0004782,3.99e-12,3;UBERON:0003281,3.99e-12,3;UBERON:0009664,3.99e-12,3;UBERON:0002296,3.99e-12,3;UBERON:0005602,3.99e-12,3;UBERON:0001179,3.99e-12,3;UBERON:0006293,3.99e-12,3;UBERON:0006914,1.37e-11,25;UBERON:0003887,2.09e-11,12;UBERON:0002134,4.46e-10,1;UBERON:0005208,4.46e-10,1;UBERON:0005946,4.46e-10,1;UBERON:0005965,4.46e-10,1;UBERON:0002078,4.46e-10,1;UBERON:0000947,9.70e-10,21;UBERON:0010191,9.70e-10,21;UBERON:0003914,2.65e-08,117;UBERON:0004111,4.70e-07,240;UBERON:0003886,8.73e-07,54 | |||
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|short_description=p19@RIN2 | |short_description=p19@RIN2 | ||
}} | }} |
Latest revision as of 16:09, 24 September 2015
Short description: | p19@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000488077_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.36e-37 | 36 |
endothelial cell of vascular tree | 4.67e-33 | 24 |
meso-epithelial cell | 4.17e-29 | 45 |
lymphangioblast | 2.06e-22 | 6 |
endothelial cell of lymphatic vessel | 2.06e-22 | 6 |
vascular lymphangioblast | 2.06e-22 | 6 |
lining cell | 4.33e-22 | 58 |
barrier cell | 4.33e-22 | 58 |
blood vessel endothelial cell | 2.88e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.88e-16 | 18 |
endothelial cell of artery | 5.15e-15 | 9 |
aortic endothelial cell | 6.24e-13 | 6 |
mesodermal cell | 6.72e-13 | 121 |
capillary endothelial cell | 3.01e-12 | 3 |
glomerular endothelial cell | 1.15e-07 | 5 |