FFCP PHASE1:Hg19::chr4:187812086..187812091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-339bp_to_ENST00000507644_5end | |association_with_transcript=-339bp_to_ENST00000507644_5end | ||
|cluster_id=chr4:187812086..187812091,+ | |||
|coexpression_cluster_id=C100 | |coexpression_cluster_id=C100 | ||
|description=CAGE_peak_1_at_ENST00000507644_5end | |description=CAGE_peak_1_at_ENST00000507644_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;3.74e-14;3 | |ontology_enrichment_celltype_v019=CL:0000322;3.74e-14;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.62e-14,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!2.60e-08!14;DOID:3910!3.50e-08!2;DOID:14566!1.46e-07!239;DOID:162!3.11e-07!235 | |ontology_enrichment_disease=DOID:1749!2.60e-08!14;DOID:3910!3.50e-08!2;DOID:14566!1.46e-07!239;DOID:162!3.11e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.00e-20;2!DOID:0060085;1.24e-11;1!DOID:3165;1.24e-11;1!DOID:0060121;1.24e-11;1!DOID:2438;1.24e-11;1!DOID:4418;1.24e-11;1!DOID:3151;4.67e-11;1!DOID:3149;4.67e-11;1!DOID:3908;7.40e-09;5!DOID:1749;5.40e-07;14 | |ontology_enrichment_disease_v019=DOID:3910;1.00e-20;2!DOID:0060085;1.24e-11;1!DOID:3165;1.24e-11;1!DOID:0060121;1.24e-11;1!DOID:2438;1.24e-11;1!DOID:4418;1.24e-11;1!DOID:3151;4.67e-11;1!DOID:3149;4.67e-11;1!DOID:3908;7.40e-09;5!DOID:1749;5.40e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,9.53e-21,2;DOID:0060085,1.18e-11,1;DOID:3165,1.18e-11,1;DOID:0060121,1.18e-11,1;DOID:2438,1.18e-11,1;DOID:4418,1.18e-11,1;DOID:3151,5.43e-11,1;DOID:3149,5.43e-11,1;DOID:3908,7.26e-09,5;DOID:1749,5.68e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004903!3.50e-08!2;UBERON:0002173!3.50e-08!2;UBERON:0002186!3.50e-08!2;UBERON:0000059!1.29e-07!11;UBERON:0003135!1.89e-07!11;UBERON:0000473!6.56e-07!8 | |ontology_enrichment_uberon=UBERON:0004903!3.50e-08!2;UBERON:0002173!3.50e-08!2;UBERON:0002186!3.50e-08!2;UBERON:0000059!1.29e-07!11;UBERON:0003135!1.89e-07!11;UBERON:0000473!6.56e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.00e-20;2!UBERON:0002173;1.00e-20;2!UBERON:0002186;1.00e-20;2!UBERON:0000059;1.58e-14;11!UBERON:0004821;3.74e-14;3!UBERON:0007499;3.74e-14;3!UBERON:0003215;3.74e-14;3!UBERON:0010368;3.74e-14;3!UBERON:0009911;3.74e-14;3!UBERON:0002299;3.74e-14;3!UBERON:0006524;3.74e-14;3!UBERON:0008874;3.74e-14;3!UBERON:0002169;3.74e-14;3!UBERON:0004894;3.74e-14;3!UBERON:0000014;6.02e-11;4!UBERON:0009856;7.53e-11;4!UBERON:0001052;8.74e-11;4!UBERON:0000160;5.79e-09;17!UBERON:0004907;8.33e-09;5!UBERON:0005409;4.74e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.00e-20;2!UBERON:0002173;1.00e-20;2!UBERON:0002186;1.00e-20;2!UBERON:0000059;1.58e-14;11!UBERON:0004821;3.74e-14;3!UBERON:0007499;3.74e-14;3!UBERON:0003215;3.74e-14;3!UBERON:0010368;3.74e-14;3!UBERON:0009911;3.74e-14;3!UBERON:0002299;3.74e-14;3!UBERON:0006524;3.74e-14;3!UBERON:0008874;3.74e-14;3!UBERON:0002169;3.74e-14;3!UBERON:0004894;3.74e-14;3!UBERON:0000014;6.02e-11;4!UBERON:0009856;7.53e-11;4!UBERON:0001052;8.74e-11;4!UBERON:0000160;5.79e-09;17!UBERON:0004907;8.33e-09;5!UBERON:0005409;4.74e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.53e-21,2;UBERON:0002173,9.53e-21,2;UBERON:0002186,9.53e-21,2;UBERON:0000059,1.23e-14,11;UBERON:0004821,3.62e-14,3;UBERON:0003215,3.62e-14,3;UBERON:0010368,3.62e-14,3;UBERON:0009911,3.62e-14,3;UBERON:0002299,3.62e-14,3;UBERON:0006524,3.62e-14,3;UBERON:0008874,3.62e-14,3;UBERON:0002169,3.62e-14,3;UBERON:0004894,3.62e-14,3;UBERON:0000014,6.33e-11,4;UBERON:0001052,7.35e-11,4;UBERON:0000160,4.99e-09,17;UBERON:0004907,7.26e-09,5 | |||
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| ||
|short_description=p1@ENST00000507644 | |short_description=p1@ENST00000507644 | ||
}} | }} |
Latest revision as of 04:11, 30 July 2015
Short description: | p1@ENST00000507644 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000507644_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | -339bp_to_ENST00000507644_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.62e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.53e-21 | 2 |
alveolar duct | 9.53e-21 | 2 |
bronchiole | 9.53e-21 | 2 |
large intestine | 1.23e-14 | 11 |
pulmonary alveolus epithelium | 3.62e-14 | 3 |
alveolus | 3.62e-14 | 3 |
pulmonary lobule | 3.62e-14 | 3 |
lobule | 3.62e-14 | 3 |
alveolus of lung | 3.62e-14 | 3 |
alveolar system | 3.62e-14 | 3 |
pulmonary acinus | 3.62e-14 | 3 |
alveolar sac | 3.62e-14 | 3 |
alveolar wall | 3.62e-14 | 3 |
zone of skin | 6.33e-11 | 4 |
rectum | 7.35e-11 | 4 |
intestine | 4.99e-09 | 17 |
lower digestive tract | 7.26e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.53e-21 | 2 |
organ system benign neoplasm | 1.18e-11 | 1 |
skin benign neoplasm | 1.18e-11 | 1 |
integumentary system benign neoplasm | 1.18e-11 | 1 |
dermis tumor | 1.18e-11 | 1 |
cutaneous fibrous histiocytoma | 1.18e-11 | 1 |
skin squamous cell carcinoma | 5.43e-11 | 1 |
keratoacanthoma | 5.43e-11 | 1 |
non-small cell lung carcinoma | 7.26e-09 | 5 |
squamous cell carcinoma | 5.68e-07 | 14 |