FFCP PHASE1:Hg19::chr2:21231676..21231681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=Q13789 | |UniProt=Q13789 | ||
|association_with_transcript=-160bp_to_X03324_5end | |association_with_transcript=-160bp_to_X03324_5end | ||
|cluster_id=chr2:21231676..21231681,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_75_at_APOB_5end | |description=CAGE_peak_75_at_APOB_5end | ||
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|ontology_enrichment_celltype=CL:0000181!9.46e-43!12;CL:0000417!9.46e-43!12;CL:0000668!9.46e-43!12;CL:0000414!9.46e-43!12;CL:0000412!9.46e-43!12;CL:0000182!9.46e-43!12;CL:0000223!9.05e-15!59 | |ontology_enrichment_celltype=CL:0000181!9.46e-43!12;CL:0000417!9.46e-43!12;CL:0000668!9.46e-43!12;CL:0000414!9.46e-43!12;CL:0000412!9.46e-43!12;CL:0000182!9.46e-43!12;CL:0000223!9.05e-15!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.96e-59;12 | |ontology_enrichment_celltype_v019=CL:0000182;8.96e-59;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.49e-59,12;CL:0000223,1.45e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.68e-64;11!UBERON:0009497;4.82e-54;13!UBERON:0001041;9.42e-24;30!UBERON:0003104;6.25e-23;31!CL:0000223;7.14e-09;58 | |ontology_enrichment_development_v019=UBERON:0004161;9.68e-64;11!UBERON:0009497;4.82e-54;13!UBERON:0001041;9.42e-24;30!UBERON:0003104;6.25e-23;31!CL:0000223;7.14e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;1.53e-07;39 | |ontology_enrichment_disease_v019=DOID:7;1.53e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,3.31e-07,39 | |||
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|short_description=p75@APOB | |short_description=p75@APOB | ||
}} | }} |
Latest revision as of 23:17, 19 September 2015
Short description: | p75@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_75_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -160bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.49e-59 | 12 |
endodermal cell | 1.45e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.31e-07 | 39 |