FFCP PHASE1:Hg19::chr15:68344995..68345013,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:68344995..68345013,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr15:68344995..68345013,+ | |description=CAGE_peak_at_chr15:68344995..68345013,+ | ||
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|ontology_enrichment_celltype=CL:0000349!4.68e-19!3;CL:0002577!4.68e-19!3;CL:0002541!5.29e-19!3;CL:0002536!1.56e-13!2;CL:0002537!6.08e-12!5;CL:0002574!4.60e-07!1;CL:0002563!6.03e-07!4 | |ontology_enrichment_celltype=CL:0000349!4.68e-19!3;CL:0002577!4.68e-19!3;CL:0002541!5.29e-19!3;CL:0002536!1.56e-13!2;CL:0002537!6.08e-12!5;CL:0002574!4.60e-07!1;CL:0002563!6.03e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.47e-79;19!CL:0002577;1.23e-45;3!CL:0002536;1.08e-31;2!CL:0002537;2.41e-28;5!CL:0002541;2.53e-21;3!CL:1000415;3.57e-09;2 | |ontology_enrichment_celltype_v019=CL:0000349;6.47e-79;19!CL:0002577;1.23e-45;3!CL:0002536;1.08e-31;2!CL:0002537;2.41e-28;5!CL:0002541;2.53e-21;3!CL:1000415;3.57e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.22e-79,19;CL:0002577,1.23e-45,3;CL:0002536,1.17e-31,2;CL:0002537,1.74e-28,5;CL:0002541,3.28e-21,3;CL:1000415,3.71e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.93e-16;1 | |ontology_enrichment_development_v019=UBERON:0003124;1.93e-16;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.28e-61!14;UBERON:0000158!4.28e-61!14;UBERON:0003124!5.74e-42!7;UBERON:0000478!1.17e-34!24;UBERON:0001987!9.38e-25!4;UBERON:0004340!9.38e-25!4;UBERON:0000305!2.59e-22!7;UBERON:0004871!1.68e-19!8;UBERON:0000476!5.29e-19!3;UBERON:0000920!5.29e-19!3;UBERON:0004923!3.26e-18!57;UBERON:0000995!7.46e-10!21;UBERON:0005795!2.22e-09!22;UBERON:0003975!2.22e-09!22;UBERON:0004175!3.49e-08!25;UBERON:0001242!6.03e-07!4;UBERON:0001262!6.03e-07!4;UBERON:0004786!6.03e-07!4;UBERON:0004808!6.03e-07!4;UBERON:0001277!6.03e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!4.28e-61!14;UBERON:0000158!4.28e-61!14;UBERON:0003124!5.74e-42!7;UBERON:0000478!1.17e-34!24;UBERON:0001987!9.38e-25!4;UBERON:0004340!9.38e-25!4;UBERON:0000305!2.59e-22!7;UBERON:0004871!1.68e-19!8;UBERON:0000476!5.29e-19!3;UBERON:0000920!5.29e-19!3;UBERON:0004923!3.26e-18!57;UBERON:0000995!7.46e-10!21;UBERON:0005795!2.22e-09!22;UBERON:0003975!2.22e-09!22;UBERON:0004175!3.49e-08!25;UBERON:0001242!6.03e-07!4;UBERON:0001262!6.03e-07!4;UBERON:0004786!6.03e-07!4;UBERON:0004808!6.03e-07!4;UBERON:0001277!6.03e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.15e-75;24!UBERON:0005631;2.55e-74;10!UBERON:0000158;2.55e-74;10!UBERON:0001987;3.14e-60;4!UBERON:0000305;9.22e-55;7!UBERON:0003124;2.53e-21;3!UBERON:0000920;2.53e-21;3!UBERON:0004923;1.46e-11;55!UBERON:0000077;2.93e-09;27 | |ontology_enrichment_uberon_v019=UBERON:0000478;2.15e-75;24!UBERON:0005631;2.55e-74;10!UBERON:0000158;2.55e-74;10!UBERON:0001987;3.14e-60;4!UBERON:0000305;9.22e-55;7!UBERON:0003124;2.53e-21;3!UBERON:0000920;2.53e-21;3!UBERON:0004923;1.46e-11;55!UBERON:0000077;2.93e-09;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-129,14;UBERON:0000158,1.43e-129,14;UBERON:0003124,8.93e-77,7;UBERON:0000478,2.40e-75,24;UBERON:0001987,4.28e-60,4;UBERON:0004340,4.28e-60,4;UBERON:0000305,6.62e-55,7;UBERON:0004871,4.41e-48,8;UBERON:0004923,3.96e-32,66;UBERON:0000920,3.28e-21,3;UBERON:0000995,8.48e-12,21;UBERON:0005795,2.82e-11,22;UBERON:0003975,2.82e-11,22;UBERON:0004175,5.88e-10,25;UBERON:0000077,1.28e-08,29;UBERON:0003134,8.32e-07,37;UBERON:0000474,8.32e-07,37 | |||
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|short_description=p@chr15:68344995..68345013,+ | |short_description=p@chr15:68344995..68345013,+ | ||
}} | }} |
Latest revision as of 03:40, 25 July 2015
Short description: | p@chr15:68344995..68345013, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68344995..68345013, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.22e-79 | 19 |
placental epithelial cell | 1.23e-45 | 3 |
amniotic epithelial cell | 1.17e-31 | 2 |
amnion mesenchymal stem cell | 1.74e-28 | 5 |
chorionic membrane mesenchymal stem cell | 3.28e-21 | 3 |
epithelial cell of gall bladder | 3.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.43e-129 | 14 |
membranous layer | 1.43e-129 | 14 |
chorion | 8.93e-77 | 7 |
extraembryonic structure | 2.40e-75 | 24 |
placenta | 4.28e-60 | 4 |
allantois | 4.28e-60 | 4 |
amnion | 6.62e-55 | 7 |
somatic layer of lateral plate mesoderm | 4.41e-48 | 8 |
organ component layer | 3.96e-32 | 66 |
egg chorion | 3.28e-21 | 3 |
uterus | 8.48e-12 | 21 |
embryonic uterus | 2.82e-11 | 22 |
internal female genitalia | 2.82e-11 | 22 |
internal genitalia | 5.88e-10 | 25 |
mixed endoderm/mesoderm-derived structure | 1.28e-08 | 29 |
female reproductive organ | 8.32e-07 | 37 |
female reproductive system | 8.32e-07 | 37 |