FFCP PHASE1:Hg19::chr22:33255417..33255424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_X80791_5end | |association_with_transcript=-38bp_to_X80791_5end | ||
|cluster_id=chr22:33255417..33255424,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_18_at_TIMP3_5end | |description=CAGE_peak_18_at_TIMP3_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.69e-10!180;CL:0002334!3.12e-09!12 | |ontology_enrichment_celltype=CL:0000055!4.69e-10!180;CL:0002334!3.12e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.91e-15;12!CL:0002541;3.61e-14;3!CL:0000349;7.21e-13;19!CL:0002583;7.60e-09;2 | |ontology_enrichment_celltype_v019=CL:0002334;1.91e-15;12!CL:0002541;3.61e-14;3!CL:0000349;7.21e-13;19!CL:0002583;7.60e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.70e-15,12;CL:0002541,3.64e-14,3;CL:0000349,8.55e-13,19;CL:0002583,7.04e-09,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.22e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;6.22e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.36e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004923!4.19e-11!57;UBERON:0005631!6.19e-09!14;UBERON:0000158!6.19e-09!14 | |ontology_enrichment_uberon=UBERON:0004923!4.19e-11!57;UBERON:0005631!6.19e-09!14;UBERON:0000158!6.19e-09!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.40e-15;10!UBERON:0000158;6.40e-15;10!UBERON:0003124;3.61e-14;3!UBERON:0000920;3.61e-14;3!UBERON:0000478;1.43e-12;24!UBERON:0002072;7.61e-08;5!UBERON:0003688;7.65e-07;6!UBERON:0002358;7.65e-07;6!UBERON:0003684;7.65e-07;6!UBERON:0001178;7.65e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0005631;6.40e-15;10!UBERON:0000158;6.40e-15;10!UBERON:0003124;3.61e-14;3!UBERON:0000920;3.61e-14;3!UBERON:0000478;1.43e-12;24!UBERON:0002072;7.61e-08;5!UBERON:0003688;7.65e-07;6!UBERON:0002358;7.65e-07;6!UBERON:0003684;7.65e-07;6!UBERON:0001178;7.65e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.13e-18,14;UBERON:0000158,3.13e-18,14;UBERON:0003124,1.48e-15,7;UBERON:0000920,3.64e-14,3;UBERON:0000478,1.55e-12,24;UBERON:0004923,2.62e-09,66;UBERON:0002072,7.03e-08,5 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,2.00146596706261,0.893922188854576,0,2.53299878168311,0,0,0.245733936501509,0,1.09220686065086,0.527533956456907,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.144846518960824,2.3858578411533,0,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,0.264818361626438,2.29469296599051,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.206651562351531,0,0.989067717114227,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0,0.211931901159562,1.20036438433761,0.412210116953756,0.257640540045629,0.558350568994769,0.675105328965065,0.487185025805993,0.504867548488229,0.552299391853796,1.2931684545505,1.42003837006646,0.403008392910561,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.977424915930974,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0.468008530278475,0,0,0.16798212819886,0.141775097242386,0,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0.6312121671319,0.063497894292169,0,0,0,0.102827492703324,1.20137223137567,0,0.336393253036082,0,0.1466765716419,1.03417372606222,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.35142424497814,0.300946099727719,11.3703752027992,1.03473071292505,0,0.184369168541703,0.60818530127658,0.391602314925481,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,1.98486246255021,0.767309866440312,1.12264037773229,1.02511319404561,3.58195074346692,0.64341568457443,0,1.07946785661859,1.59805552781814,0.739144404124282,1.03850885836724,0.232420756919918,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,1.95227036798582,0.618246069886334,0,0,0,0.650060246036521,0,0.386682873168488,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0.356128142586949,0.330569830721956,0.384380134730212,0,0,0.464845549297286,1.25924938732256,0,0.616067160352178,0,0,0.18532421910392,0,0.372158369359667,0,0.38126038784765,0.767693373934002,1.28381696410176,0,0,0.179872457583315,0,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0.974853958525138,2.11300293513511,0.409499734223957,0.424216295861138,3.39024349860728,0.551365343546124,0,0.438450885253763,0.578775534266688,1.9676842561399,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,1.17206543417515,0,0,0,1.19372242368845,0.296964680832639,3.99308912729002,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0.102268682502155,0,3.42143546427988,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.923403102045565,0.113942055847001,0.23056390438806,0,0.108647371922008,9.57003479195758,6.3202339447285,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0.103688191397247,0.664653872707185,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0,0,0.305994652908965,0.866851769704557,0,0,0,0,0,3.0721064139948,0.458320848023367,0,0,0,0.223171457441873,0.201550417460179,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.209818352539992,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0,0,1.49502377594773,0.78602152549833,0.414239055347196,0,0,0,0,1.08803560673895,0,0.612691153526923,0.655745261419609,0,0,0.122026264901963,0,0,0,0.18628920882415,0.138348634936231,0,0.454947352624943,0.285465333544967,2.35265819698172,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0,0,0,0,1.24411862352257,1.06336685823198,1.04349012362347,0.300515217994437,2.66563648518157,0.813741466409323,0,0,0,1.99047944349308,0,1.37358282073117,2.35724642136143,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,1.05802783107205,0.3062454773532,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0,0.3668571970433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| ||
|short_description=p18@TIMP3 | |short_description=p18@TIMP3 | ||
}} | }} |
Latest revision as of 22:38, 19 September 2015
Short description: | p18@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -38bp_to_X80791_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.70e-15 | 12 |
chorionic membrane mesenchymal stem cell | 3.64e-14 | 3 |
extraembryonic cell | 8.55e-13 | 19 |
subcutaneous preadipocyte | 7.04e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.13e-18 | 14 |
membranous layer | 3.13e-18 | 14 |
chorion | 1.48e-15 | 7 |
egg chorion | 3.64e-14 | 3 |
extraembryonic structure | 1.55e-12 | 24 |
organ component layer | 2.62e-09 | 66 |
hypodermis | 7.03e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.36e-07 | 14 |