FFCP PHASE1:Hg19::chr12:53774025..53774031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6667 | |EntrezGene=6667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11205 | |HGNC=11205 | ||
|TSSclassifier=strong | |||
|UniProt=E4Z9M7,P08047 | |UniProt=E4Z9M7,P08047 | ||
|association_with_transcript=46bp_to_NM_001251825,NM_138473,uc001scw.2_5end | |association_with_transcript=46bp_to_NM_001251825,NM_138473,uc001scw.2_5end | ||
|cluster_id=chr12:53774025..53774031,+ | |||
|description=CAGE_peak_10_at_SP1_5end | |description=CAGE_peak_10_at_SP1_5end | ||
|id=chr12:53774025..53774031,+ | |id=chr12:53774025..53774031,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.03e-26;3!CL:0000097;9.03e-16;5!CL:0000081;9.97e-13;11!CL:0000094;2.26e-10;8!CL:0000163;5.36e-09;9 | |ontology_enrichment_celltype_v019=CL:0000775;1.03e-26;3!CL:0000097;9.03e-16;5!CL:0000081;9.97e-13;11!CL:0000094;2.26e-10;8!CL:0000163;5.36e-09;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.04e-26,3;CL:0000097,8.62e-16,5;CL:0002028,8.62e-16,5;CL:0000081,8.34e-13,11;CL:0000094,2.27e-10,8;CL:0000163,5.23e-09,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.25e-09;1!UBERON:0001301;1.25e-09;1!UBERON:0000026;1.25e-09;1!UBERON:0008784;1.25e-09;1!UBERON:0006058;1.25e-09;1!UBERON:0003663;1.25e-09;1!UBERON:0004256;1.25e-09;1!UBERON:0004708;1.25e-09;1!UBERON:0002101;1.25e-09;1!UBERON:0004709;1.25e-09;1!UBERON:0002529;1.25e-09;1!UBERON:0010538;1.25e-09;1!UBERON:0003661;1.25e-09;1!UBERON:0010890;1.25e-09;1!UBERON:0002471;1.25e-09;1!UBERON:0001383;1.25e-09;1!UBERON:0010758;1.25e-09;1!UBERON:0010707;1.25e-09;1!UBERON:0000978;1.25e-09;1!UBERON:0002103;1.25e-09;1!UBERON:0001665;1.25e-09;1!UBERON:0003823;1.25e-09;1!UBERON:0000154;1.25e-09;1!UBERON:0010709;1.25e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0001389;1.25e-09;1!UBERON:0001301;1.25e-09;1!UBERON:0000026;1.25e-09;1!UBERON:0008784;1.25e-09;1!UBERON:0006058;1.25e-09;1!UBERON:0003663;1.25e-09;1!UBERON:0004256;1.25e-09;1!UBERON:0004708;1.25e-09;1!UBERON:0002101;1.25e-09;1!UBERON:0004709;1.25e-09;1!UBERON:0002529;1.25e-09;1!UBERON:0010538;1.25e-09;1!UBERON:0003661;1.25e-09;1!UBERON:0010890;1.25e-09;1!UBERON:0002471;1.25e-09;1!UBERON:0001383;1.25e-09;1!UBERON:0010758;1.25e-09;1!UBERON:0010707;1.25e-09;1!UBERON:0000978;1.25e-09;1!UBERON:0002103;1.25e-09;1!UBERON:0001665;1.25e-09;1!UBERON:0003823;1.25e-09;1!UBERON:0000154;1.25e-09;1!UBERON:0010709;1.25e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.31e-10,1;UBERON:0005418,1.15e-09,1;UBERON:0001389,1.15e-09,1;UBERON:0000026,1.15e-09,1;UBERON:0008784,1.15e-09,1;UBERON:0006058,1.15e-09,1;UBERON:0003663,1.15e-09,1;UBERON:0004256,1.15e-09,1;UBERON:0004708,1.15e-09,1;UBERON:0002101,1.15e-09,1;UBERON:0004709,1.15e-09,1;UBERON:0002529,1.15e-09,1;UBERON:0010538,1.15e-09,1;UBERON:0003661,1.15e-09,1;UBERON:0010890,1.15e-09,1;UBERON:0002471,1.15e-09,1;UBERON:0001383,1.15e-09,1;UBERON:0004357,1.15e-09,1;UBERON:0004347,1.15e-09,1;UBERON:0005420,1.15e-09,1;UBERON:0005732,1.15e-09,1;UBERON:0010758,1.15e-09,1;UBERON:0010707,1.15e-09,1;UBERON:0000978,1.15e-09,1;UBERON:0002103,1.15e-09,1;UBERON:0001665,1.15e-09,1;UBERON:0003823,1.15e-09,1;UBERON:0000154,1.15e-09,1;UBERON:0010709,1.15e-09,1;UBERON:0005733,1.15e-09,1;UBERON:0005730,1.15e-09,1 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0.293600439334847,0,0,0,0.447830948479849,0,0,1.01778767145695,1.13362783106643,0,0,0.411167888021826,0.929119112685311,0,0.512321413058201,0.47296445977717,0,0,0,0.564727018627814,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0,0,0.637812899895131,0.209658645508376,0.561643155732475,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0.34362744548263,0,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0.327447688744282,0.364295288292542,0.370784442784429,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0,0.402829317109147,0,0,0.367663080345869,0,0.625098097988558,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0.61246251376468,0.245668634623536,0,0,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0.194874010322397,0.252433774244115,0.184099797284599,0.484938170456436,0.355009592516614,0.201504196455281,0,0.193260853163297,0.272746120590835,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.329250856225877,1.1240175325762,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0.790204397959275,0,0.246217006087397,0,0,0.93733833986777,0,0,0,0,0,0.492663237895943,0.616339038092582,1.86595303986695,1.00883967391873,3.53478813593864,0.380987365753014,0,2.34434894420094,0,0.205654985406647,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0,0.76228387266739,1.30139853857622,0,0,0,2.24702107184155,2.99161459204025,5.38740167466846,0.36807447515742,0,0.271265023699736,0.415941723061614,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0.606255142892519,0,0,0,0.153461973288062,0,0.384417447767103,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,0,0,0,0.262248829918848,0.902399225814824,0.15403067420883,0,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0.082509499920588,1.72279661398852,0,0,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.178064071293475,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0.284567373393656,0.159426272728822,0,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0,0,0.343505344755765,0,0.447352215784832,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0.111443384277478,0.568272293612826,0,0,0,0,0.140669416410513,0.556543525114529,0,0.422250816255987,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0.311039587661807,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,1.44999915086959,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0.331737779793674,0,0,0.10893846351899,0.278847488557207,1.23120413606075,0,0.23056390438806,0.359030577639089,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0.210998064528027,0.163232808159148,0.424059214301822,0.216388639742091,0,0.619202951523374,0.611030144933625,1.48260564340311,0.247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| ||
|short_description=p10@SP1 | |short_description=p10@SP1 | ||
}} | }} |
Latest revision as of 02:53, 19 September 2015
Short description: | p10@SP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_NM_001251825, NM_138473, uc001scw.2_5end |
EntrezGene: | SP1 |
HGNC: | 11205 |
UniProt: | E4Z9M7P08047 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.04e-26 | 3 |
mast cell | 8.62e-16 | 5 |
basophil mast progenitor cell | 8.62e-16 | 5 |
blood cell | 8.34e-13 | 11 |
granulocyte | 2.27e-10 | 8 |
endocrine cell | 5.23e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
epididymis | 6.31e-10 | 1 |
hindlimb bud | 1.15e-09 | 1 |
soleus muscle | 1.15e-09 | 1 |
appendage | 1.15e-09 | 1 |
lower limb segment | 1.15e-09 | 1 |
multi-limb segment region | 1.15e-09 | 1 |
hindlimb muscle | 1.15e-09 | 1 |
hindlimb zeugopod muscle | 1.15e-09 | 1 |
paired limb/fin | 1.15e-09 | 1 |
limb | 1.15e-09 | 1 |
pelvic appendage | 1.15e-09 | 1 |
limb segment | 1.15e-09 | 1 |
paired limb/fin segment | 1.15e-09 | 1 |
limb muscle | 1.15e-09 | 1 |
pelvic complex muscle | 1.15e-09 | 1 |
zeugopod | 1.15e-09 | 1 |
muscle of leg | 1.15e-09 | 1 |
paired limb/fin bud | 1.15e-09 | 1 |
limb bud | 1.15e-09 | 1 |
pelvic appendage bud | 1.15e-09 | 1 |
limb/fin field | 1.15e-09 | 1 |
subdivision of organism along appendicular axis | 1.15e-09 | 1 |
appendage girdle complex | 1.15e-09 | 1 |
leg | 1.15e-09 | 1 |
hindlimb | 1.15e-09 | 1 |
triceps surae | 1.15e-09 | 1 |
hindlimb zeugopod | 1.15e-09 | 1 |
posterior region of body | 1.15e-09 | 1 |
pelvic complex | 1.15e-09 | 1 |
limb field | 1.15e-09 | 1 |
hindlimb/pelvic fin field | 1.15e-09 | 1 |